Gene
RNA
| Item | Value |
|---|---|
| gene id | G226209 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13188789 ~ 13189160 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU258754 | True | 372 | lncRNA | 0.51 | 1 | 13188789 | 13189160 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cxcr3.1 | cxcr3b | coding | downstream | 259725 | 12925454 ~ 12929064 (-) |
| LOC110503616 | LOC106605556 | coding | downstream | 305773 | 12880885 ~ 12883016 (-) |
| tlr21 | LOC106605556 | coding | downstream | 313101 | 12864942 ~ 12875688 (-) |
| LOC110509927 | LOC106578751 | coding | downstream | 328200 | 12856694 ~ 12860589 (-) |
| LOC110509869 | NA | coding | downstream | 424808 | 12761519 ~ 12763981 (-) |
| LOC110510146 | mrpl17 | coding | upstream | 150033 | 13339193 ~ 13341845 (-) |
| LOC110510138 | trp-ii | coding | upstream | 156949 | 13346109 ~ 13347872 (-) |
| LOC110503661 | trp-i | coding | upstream | 170722 | 13359882 ~ 13360962 (-) |
| LOC110510120 | LOC106577461 | coding | upstream | 187695 | 13376855 ~ 13378759 (-) |
| LOC110510106 | LOC106577440 | coding | upstream | 199249 | 13388409 ~ 13410671 (-) |
| G226208 | NA | non-coding | downstream | 370 | 13187899 ~ 13188419 (-) |
| G226188 | NA | non-coding | downstream | 6980 | 13180988 ~ 13181809 (-) |
| G226126 | NA | non-coding | downstream | 120195 | 13068294 ~ 13068594 (-) |
| G226123 | NA | non-coding | downstream | 129622 | 13058934 ~ 13059167 (-) |
| G226106 | LOC106578882 | non-coding | downstream | 152220 | 13034573 ~ 13036569 (-) |
| G226210 | NA | non-coding | upstream | 1760 | 13190920 ~ 13194671 (-) |
| G226215 | arhgef1 | non-coding | upstream | 14184 | 13203344 ~ 13205132 (-) |
| G226214 | NA | non-coding | upstream | 16912 | 13206072 ~ 13207814 (-) |
| G226221 | NA | non-coding | upstream | 26715 | 13215875 ~ 13216756 (-) |
| G226222 | NA | non-coding | upstream | 27715 | 13216875 ~ 13217150 (-) |
| G226187 | NA | other | downstream | 8517 | 13177178 ~ 13180272 (-) |
| G226124 | NA | other | downstream | 121432 | 13066873 ~ 13067357 (-) |
| G225171 | LOC106605713 | other | downstream | 715729 | 12472299 ~ 12473060 (-) |
| G225127 | LOC106605865 | other | downstream | 730998 | 12454388 ~ 12457791 (-) |
| G225099 | NA | other | downstream | 847823 | 12336241 ~ 12340966 (-) |
| G226224 | NA | other | upstream | 34724 | 13223884 ~ 13224515 (-) |
| G226294 | LOC100136012 | other | upstream | 154914 | 13344074 ~ 13344375 (-) |
| wu:fe05a04 | LOC106578221 | other | upstream | 737514 | 13909746 ~ 13927861 (-) |
| LOC110538195 | LOC106578103 | other | upstream | 810576 | 13995196 ~ 14023153 (-) |
| G227060 | NA | other | upstream | 1239633 | 14428793 ~ 14475166 (-) |
