G229354


Basic Information

Item Value
gene id G229354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 16800934 ~ 16801349 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU262362
GTGGAAGAGGGAGCGGCTGAGGGTGGAGTCCAGTTGTAGGCATGGCCGGTTGTCAGGGTCTGCAGGGGGGCGGAGGTCCTCCACACAGCTGGTCAGACGAACACGCTTCTTACAGGGCTCAGCTCCTCTAGATGGGGGACATTTGAGGACCAAGAGTGTATTAGAAGAGAAATAGGTGTGACTACCTCAAAATTAAAAATAAGATGCCTTAATCAGAATCaaggaggatagggagagagaagaaagagacatGGATGGTaggtaagggaggagagggaagaaaggacagggagagggaagaaagagacatGGATGGTaggtaagggaggagagggaagaaagagacatGGATGTAGGTAagaga

Function

NR:

description
PREDICTED: uncharacterized protein LOC106605495

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262362 True 364 lncRNA 0.30 2 16800934 16801349

Neighbor

gene id symbol gene type direction distance location
LOC110512031 grik2 coding downstream 378957 16187381 ~ 16421977 (-)
LOC118946082 NA coding downstream 835489 15965041 ~ 15965445 (-)
LOC118944492 NA coding downstream 865490 15932818 ~ 15935521 (-)
LOC110503781 LOC106605653 coding downstream 888205 15900898 ~ 15912729 (-)
LOC110512120 LOC106605647 coding downstream 939365 15853231 ~ 15861569 (-)
cep162 cep162 coding upstream 3653 16805002 ~ 16826110 (-)
LOC110503762 LOC106605503 coding upstream 274164 17075513 ~ 17188347 (-)
LOC118946294 NA coding upstream 301116 17102465 ~ 17105382 (-)
LOC110511923 LOC106579390 coding upstream 1139169 17940518 ~ 17947436 (-)
LOC110511898 LOC106579390 coding upstream 1155899 17957248 ~ 17964878 (-)
G229304 NA non-coding downstream 14727 16777240 ~ 16786207 (-)
G229312 NA non-coding downstream 76244 16723429 ~ 16724690 (-)
G229274 NA non-coding downstream 135249 16665191 ~ 16665685 (-)
G229016 NA non-coding downstream 614993 16185410 ~ 16185941 (-)
G229009 NA non-coding downstream 623508 16177170 ~ 16177426 (-)
G229379 NA non-coding upstream 48339 16849688 ~ 16849899 (-)
G229400 NA non-coding upstream 71002 16872351 ~ 16872565 (-)
G229415 NA non-coding upstream 80473 16881822 ~ 16882595 (-)
G229440 NA non-coding upstream 96670 16898019 ~ 16898275 (-)
G229442 NA non-coding upstream 98867 16900216 ~ 16900574 (-)
G228191 LOC106578455 other downstream 1009769 15762029 ~ 15791401 (-)
G228098 fbrl other downstream 1092669 15706234 ~ 15708265 (-)
G228094 NA other downstream 1199446 15601015 ~ 15601488 (-)
LOC110512327 LOC106578554 other downstream 1262619 15536363 ~ 15539677 (-)
LOC110503689 tm149 other downstream 2164224 14598789 ~ 14638314 (-)
G229373 LOC100194703 other upstream 38040 16839389 ~ 16839839 (-)
G229380 LOC106605502 other upstream 48623 16849972 ~ 16850199 (-)
G229707 NA other upstream 243676 17043792 ~ 17048344 (-)
LOC110505118 LOC106579600 other upstream 1173896 17975160 ~ 17985544 (-)
LOC110503747 lars2 other upstream 1292407 18093704 ~ 18154474 (-)

Expression


Co-expression Network