G229379



Basic Information


Item Value
gene id G229379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 16849688 ~ 16849899 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU262392
GGCTTGCATTGATATGATAGTATGAATATCAAATCTGAACATTATGCTATTGACTGTTGTTTTTATTGACACAAACCTGATGGCATTACTAAACctgtaatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaatatataaaactgtatttttttgtgaagaatcaacaac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU262392 True 212 lncRNA 0.40 1 16849688 16849899

Neighbor


gene id symbol gene type direction distance location
cep162 cep162 coding downstream 23578 16805002 ~ 16826110 (-)
LOC110512031 grik2 coding downstream 427711 16187381 ~ 16421977 (-)
LOC118946082 NA coding downstream 884243 15965041 ~ 15965445 (-)
LOC118944492 NA coding downstream 914244 15932818 ~ 15935521 (-)
LOC110503781 LOC106605653 coding downstream 936959 15900898 ~ 15912729 (-)
LOC110503762 LOC106605503 coding upstream 225614 17075513 ~ 17188347 (-)
LOC118946294 NA coding upstream 252566 17102465 ~ 17105382 (-)
LOC110511923 LOC106579390 coding upstream 1090619 17940518 ~ 17947436 (-)
LOC110511898 LOC106579390 coding upstream 1107349 17957248 ~ 17964878 (-)
LOC110511884 cg024 coding upstream 1118110 17968009 ~ 17969851 (-)
G229354 NA non-coding downstream 48339 16800934 ~ 16801349 (-)
G229304 NA non-coding downstream 63481 16777240 ~ 16786207 (-)
G229312 NA non-coding downstream 124998 16723429 ~ 16724690 (-)
G229274 NA non-coding downstream 184003 16665191 ~ 16665685 (-)
G229016 NA non-coding downstream 663747 16185410 ~ 16185941 (-)
G229400 NA non-coding upstream 22452 16872351 ~ 16872565 (-)
G229415 NA non-coding upstream 31923 16881822 ~ 16882595 (-)
G229440 NA non-coding upstream 48120 16898019 ~ 16898275 (-)
G229442 NA non-coding upstream 50317 16900216 ~ 16900574 (-)
G229474 NA non-coding upstream 77684 16927583 ~ 16927973 (-)
G229373 LOC100194703 other downstream 9849 16839389 ~ 16839839 (-)
G228191 LOC106578455 other downstream 1058523 15762029 ~ 15791401 (-)
G228098 fbrl other downstream 1141423 15706234 ~ 15708265 (-)
G228094 NA other downstream 1248200 15601015 ~ 15601488 (-)
LOC110512327 LOC106578554 other downstream 1311373 15536363 ~ 15539677 (-)
G229380 LOC106605502 other upstream 73 16849972 ~ 16850199 (-)
G229707 NA other upstream 195126 17043792 ~ 17048344 (-)
LOC110505118 LOC106579600 other upstream 1125346 17975160 ~ 17985544 (-)
LOC110503747 lars2 other upstream 1243857 18093704 ~ 18154474 (-)
G231652 rn146 other upstream 1749831 18599730 ~ 18601875 (-)

Expression



Co-expression Network