G229474



Basic Information


Item Value
gene id G229474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 16927583 ~ 16927973 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU262491
atatagcctcaaggacgtttttaaaacgccttattgtaacaaatgaactgtgtgatatttggcggagtcaacatggaggaacaaggcagtacacctgggcgcatgtgagagagaacatcatctctatggccaggttagataggttttatgtttttgagcatcaatctcaggtctgtaaatcaagtgtgataactccagtaggattttctgatcattgtttaataacagaggtggtattcattaacgatgtaaaacctaaaagctcatactggcattttaatataactttattgagtgatgctcacttcaggaaatgtttcagttttttttgggagaggtggaggtctcaaaaggccagttttgtatcccttcaacaatggtgggatatagg

Function


NR:

description
pol-like protein

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU262491 True 391 lncRNA 0.45 1 16927583 16927973

Neighbor


gene id symbol gene type direction distance location
cep162 cep162 coding downstream 101473 16805002 ~ 16826110 (-)
LOC110512031 grik2 coding downstream 505606 16187381 ~ 16421977 (-)
LOC118946082 NA coding downstream 962138 15965041 ~ 15965445 (-)
LOC118944492 NA coding downstream 992139 15932818 ~ 15935521 (-)
LOC110503781 LOC106605653 coding downstream 1014854 15900898 ~ 15912729 (-)
LOC110503762 LOC106605503 coding upstream 147540 17075513 ~ 17188347 (-)
LOC118946294 NA coding upstream 174492 17102465 ~ 17105382 (-)
LOC110511923 LOC106579390 coding upstream 1012545 17940518 ~ 17947436 (-)
LOC110511898 LOC106579390 coding upstream 1029275 17957248 ~ 17964878 (-)
LOC110511884 cg024 coding upstream 1040036 17968009 ~ 17969851 (-)
G229442 NA non-coding downstream 27009 16900216 ~ 16900574 (-)
G229440 NA non-coding downstream 29308 16898019 ~ 16898275 (-)
G229415 NA non-coding downstream 44988 16881822 ~ 16882595 (-)
G229400 NA non-coding downstream 55018 16872351 ~ 16872565 (-)
G229379 NA non-coding downstream 77684 16849688 ~ 16849899 (-)
G229498 NA non-coding upstream 21579 16949552 ~ 16949832 (-)
G229502 NA non-coding upstream 24440 16952413 ~ 16952648 (-)
G229508 NA non-coding upstream 33370 16961343 ~ 16961562 (-)
G229682 NA non-coding upstream 88332 17016305 ~ 17016521 (-)
G229685 NA non-coding upstream 92023 17019996 ~ 17020385 (-)
G229380 LOC106605502 other downstream 77384 16849972 ~ 16850199 (-)
G229373 LOC100194703 other downstream 87744 16839389 ~ 16839839 (-)
G228191 LOC106578455 other downstream 1136418 15762029 ~ 15791401 (-)
G228098 fbrl other downstream 1219318 15706234 ~ 15708265 (-)
G228094 NA other downstream 1326095 15601015 ~ 15601488 (-)
G229707 NA other upstream 117052 17043792 ~ 17048344 (-)
LOC110505118 LOC106579600 other upstream 1047272 17975160 ~ 17985544 (-)
LOC110503747 lars2 other upstream 1165783 18093704 ~ 18154474 (-)
G231652 rn146 other upstream 1671757 18599730 ~ 18601875 (-)
LOC110511176 LOC106579058 other upstream 2231327 19065512 ~ 19282368 (-)

Expression



Co-expression Network