G229415


Basic Information

Item Value
gene id G229415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 16881822 ~ 16882595 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU262428
ATTCAATGTAATATTTTGTCTCGTTGTCTTGTGTGCCATGATGTTATCATGACAACTCTGGGGGTATACTGGTGTAAACATATAGGGGACTGTTCATAAATGTATATCTAAGGAGTATTGTATCAAGACTTGTCTGTGAGACACGTCATCTCAAGTTCCCCACAGAAAGATACGGCCTCAGTAGGACCAATGCACATCTGTTGTCTAAGTGTTGCTTGACTGTTGTTATCCTGTGCATTTATTGGTTTCCCCGATGCGGTCTATCTTCAGACATGTTCTACAGCGACCTAGACCAGGGATAAGCTACTGACAcccagttcactggtcacgatggcaacacccacccgtagcacgcgctccagcaggtgtatctcactgatcatccctaaagccaacacctcatttggttgcctttccttccagttctctgctgcctgtgactggaacgaattgcaaaaatcgctgaagttggagacctttatctccctcaccaactttaaacatctgctatctgagcagctaaccgatcgctgcagctgtacatagtccatcggtaaatagcccacccaatttacctacctcatccccatactgtttttatttatttacttttctgctcttttgcacaccagtatctctacctgcacatgaccatctgataatttatcactccagtgttaatctgctaaattgtaattatttgcctacctcctcatgccttttgcacacaatgtatatagactcttttttttatttttttatactgtgttattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262428 True 774 lncRNA 0.42 1 16881822 16882595

Neighbor

gene id symbol gene type direction distance location
cep162 cep162 coding downstream 55712 16805002 ~ 16826110 (-)
LOC110512031 grik2 coding downstream 459845 16187381 ~ 16421977 (-)
LOC118946082 NA coding downstream 916377 15965041 ~ 15965445 (-)
LOC118944492 NA coding downstream 946378 15932818 ~ 15935521 (-)
LOC110503781 LOC106605653 coding downstream 969093 15900898 ~ 15912729 (-)
LOC110503762 LOC106605503 coding upstream 192918 17075513 ~ 17188347 (-)
LOC118946294 NA coding upstream 219870 17102465 ~ 17105382 (-)
LOC110511923 LOC106579390 coding upstream 1057923 17940518 ~ 17947436 (-)
LOC110511898 LOC106579390 coding upstream 1074653 17957248 ~ 17964878 (-)
LOC110511884 cg024 coding upstream 1085414 17968009 ~ 17969851 (-)
G229400 NA non-coding downstream 9257 16872351 ~ 16872565 (-)
G229379 NA non-coding downstream 31923 16849688 ~ 16849899 (-)
G229354 NA non-coding downstream 80473 16800934 ~ 16801349 (-)
G229304 NA non-coding downstream 95615 16777240 ~ 16786207 (-)
G229312 NA non-coding downstream 157132 16723429 ~ 16724690 (-)
G229440 NA non-coding upstream 15424 16898019 ~ 16898275 (-)
G229442 NA non-coding upstream 17621 16900216 ~ 16900574 (-)
G229474 NA non-coding upstream 44988 16927583 ~ 16927973 (-)
G229498 NA non-coding upstream 66957 16949552 ~ 16949832 (-)
G229502 NA non-coding upstream 69818 16952413 ~ 16952648 (-)
G229380 LOC106605502 other downstream 31623 16849972 ~ 16850199 (-)
G229373 LOC100194703 other downstream 41983 16839389 ~ 16839839 (-)
G228191 LOC106578455 other downstream 1090657 15762029 ~ 15791401 (-)
G228098 fbrl other downstream 1173557 15706234 ~ 15708265 (-)
G228094 NA other downstream 1280334 15601015 ~ 15601488 (-)
G229707 NA other upstream 162430 17043792 ~ 17048344 (-)
LOC110505118 LOC106579600 other upstream 1092650 17975160 ~ 17985544 (-)
LOC110503747 lars2 other upstream 1211161 18093704 ~ 18154474 (-)
G231652 rn146 other upstream 1717135 18599730 ~ 18601875 (-)
LOC110511176 LOC106579058 other upstream 2276705 19065512 ~ 19282368 (-)

Expression


Co-expression Network