G231079


Basic Information

Item Value
gene id G231079
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18227984 ~ 18229371 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU264241
TGAGAGCCTGTGTTTTTATTCACCTGGAGATTGTTACAGACACTGCATCACACGACAGACGCTAGTCACTGAACCTAACCAGTCTGGTCCTGTACTGTGGCTGGCAGGCGGCGCTTCAATAAGGAGCACTCACACAAGCAGAACACTCCTCAACGTTACCCTAACGTTGTGTCAATCCTACCGTAACATTGTTATAGATAAGCATAAGCCTGGCTAAACGCTTTGACTATTGCAGCAAGTTACATGCAGTGCTGCCCTACACAATGCATCTACATTACTGCGCTCAGTTCGATGCAACTGGTGTCCTGATGTTATTCTAACGTTAATATTGCAGCCAGGGCCAAGGAGTGGAGAGAAGATAATGACAGTTTTTGACCATCTTTCTCTCAAATGAGCAGAAAGACATTTCAACGGAATAAATAAGATTAGGAATCTCCAGGTCAACCATAGTCCATTTCAACATTGAAGAGAGACCCCAGAGAAAGATGTGCAGTTGCTTTCCAACTTAAATAATATGTCACTGGGATACACACATTATCATCTTGACACAATGTACATCCTCCCAATGAAAACAGTAGGCTGTCAGTAGCCTACTGTTCTCTCAGCTCTGGTCAAAGGGTACAAGTGAGGAAATGAGCTGATACAGTCACTAAACCTCTTCAGGACACTAGTTTGGACTATCTGGTGAAATCCAGAGAATCTTCAGTCAAATGCTTCATGTGTTCAtatcttttgttttatttttgaaGACTGAAGAGGTCATTTCACATTTCAAAAGGAGATATGGAGGACGATTGAGACACCAGTgtcgtaataataataataatgtattataataatatcaCAGGAAATAATGATAAAATaaaaacattttaggGAGTAAGACAAAATATCAGCCAACTCTTTCTTTCATATTCATACAGCTGCAGGAAGTCTCAAACACTAAGAATGAGCTGTCCTAAGTCAGTctttcagtcagtctctctctctctctcgtgctcgcTCTTTCCAGATAGGGTGGCGTGGAGGAAGgtttggagagagaggtggagcagGTGGGtccagtgagagaggagagatggggtagtGTCATCAGTTCAGGTCTAAAACAGCCCTATGGAGACTGGACTCTCTGGGGTGATAGTAGTAGATACTCAGAGGGGTGAAGGTCAAAGGTCAGGGTTGGTTAGAGCTGGAAGCCCTCCATGGGCCCGTCTTGCTGCTGGAAGATAAACTGGCCCTGGTTCTGGTCCACCTGCGGGGCGATGCTAgcgtcctcctcctccacaccaaAGTAGTGCTCGATCAGGTCAAAAGCCTTCTGGTAGATCTCCTGATTCTCATGGCTCTGCAGGAACTCTATCTTGT

Function

NR:

description
PREDICTED: importin subunit alpha-6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264241 True 1368 lncRNA 0.49 2 18227984 18229371

Neighbor

gene id symbol gene type direction distance location
zufsp cf113 coding downstream 8402 18210021 ~ 18219582 (-)
LOC110511774 LOC106579313 coding downstream 20962 18200058 ~ 18207022 (-)
LOC110511808 LOC106579331 coding downstream 45201 18180490 ~ 18182783 (-)
LOC110503747 lars2 coding downstream 73510 18093704 ~ 18154474 (-)
LOC110511851 LOC106579350 coding downstream 142955 18049746 ~ 18085029 (-)
LOC110511716 LOC106579594 coding upstream 8373 18237744 ~ 18248134 (-)
LOC110511708 LOC106579301 coding upstream 49587 18278958 ~ 18285197 (-)
LOC110503742 cndp1 coding upstream 61278 18290649 ~ 18292476 (-)
LOC110511684 LOC106605538 coding upstream 69368 18298739 ~ 18311500 (-)
LOC110511626 LOC106579251 coding upstream 124150 18353521 ~ 18359014 (-)
G231091 NA non-coding downstream 19709 18208074 ~ 18208275 (-)
G231081 NA non-coding downstream 28059 18198289 ~ 18199925 (-)
G231080 LOC106579327 non-coding downstream 30275 18194425 ~ 18197709 (-)
G231073 NA non-coding downstream 50303 18177445 ~ 18177681 (-)
G231072 NA non-coding downstream 51912 18175707 ~ 18176072 (-)
G231126 NA non-coding upstream 63208 18292579 ~ 18292797 (-)
G231127 NA non-coding upstream 63771 18293142 ~ 18293427 (-)
G231128 NA non-coding upstream 64104 18293475 ~ 18293701 (-)
G231129 NA non-coding upstream 65903 18295274 ~ 18295495 (-)
G231131 NA non-coding upstream 77585 18306956 ~ 18307258 (-)
LOC110505118 LOC106579600 other downstream 250075 17975160 ~ 17985544 (-)
G229707 NA other downstream 1179640 17043792 ~ 17048344 (-)
G229380 LOC106605502 other downstream 1377785 16849972 ~ 16850199 (-)
G229373 LOC100194703 other downstream 1388145 16839389 ~ 16839839 (-)
G231652 rn146 other upstream 370359 18599730 ~ 18601875 (-)
LOC110511176 LOC106579058 other upstream 929929 19065512 ~ 19282368 (-)
rims2a LOC106579570 other upstream 1312731 19416054 ~ 19652601 (-)
G232980 NA other upstream 1418715 19648086 ~ 19648629 (-)
G233052 LOC106605397 other upstream 1526833 19756204 ~ 19757908 (-)

Expression


Co-expression Network