LOC110511684 (LOC106605538)


Basic Information

Item Value
gene id LOC110511684
gene name LOC106605538
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18298739 ~ 18311500 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021592497.2
acagagaaacaTACTAATCAATGCACACTTGGATTGCCTCACAAGGATAGCAAAAACAGACTATACATTTAGAATGAATTCAGTCAAGGAGCAGAAGGGACATTTTCTCTCATCCAGCTACTAAGGAAAGGCTTGACCTCGCGACCCTTCCCATCAGGAGGTGAGCCAGTCACCGGAGGTATAAAAACCCTGTGTGTCCCCGGAGACTCCAGTCCAGTGGGTTCTGAAGACAAGGGCAACATTAAACAAGTACCAAACTTACCAGGCTACGAGATGACGATCTGGCAACTGCCTTCCATGCTCCTTGTTGTTATATCAAGTGTCTCTACTCATCCTCATCACTTATTTGAGTATGATGAGCTGAGCCAATATGTTGACAGCCATCAGGAGGAATATGTACAGactctGAGGGACTGGGTTGCTGTAGAGAGCGATTCCAGTGATGTCTTGAGGAGGCCAGACTGCCATCGCATGATGGATATGACGGCTGAGAAACTACAAGCCATGGGAGGGAAGGTGGAACTGGTGGACATCGGCGTACAAGAGCTGCCTGATGGCAAGACAGTGGCCTTACCCAAGGTGGTGACAGCCCAGTTTGGCAGTGACCCCAGTAAGCAGACAGTCTGTGTGTACGGACATGTGGATGTCCAGCCCGCTAAGCTAGAGGACGGCTGGGCCACTGAACCCTACAACCTGACCGACATCAACGGAAACCTCTACGGCAGAGGGGCGTCTGACAACAAGGCCCCTGTCTTAGCCTGGATCCATACAGTGGAGGCCTATCAGGCCCTCAGCATTGACCTGCCAGTCAATGTGAAGTTCATCATCGAGGGGATGGAGGAGACCGGGTCCAATGGCCTGGACGCCATGATCGTGGCGCAGAAAGACACGTTCTTCTCCGACGTCGAATACATCATCATCTCAGACTGTGGTTGGCTGAGCCGACGCCCCGCTCTCACCTACGGGACCAGGGGAAACTGCTACTTCTTTGCTGAGGTAGAGGGCCCAAAACAGGACCTACACTCAGGGGTGTATGGAGGCACTGTTATAGAGCCTATGACAGATCTGATTGGCATATTGGACACACTGATCAGCCCCAGTGGAAAGATCCTCATTCCAGGCATCAGAGAGGCCGTTGCCCCACTCTCAGACGAAGAGTGGAAGATGTACCAGGACATTGAGTTTGACATTGAGAGCTTTAAGTCCAAGATCGGTGTCAGTCAACTAATGTACAGCAACAAGGTAGATCTGCTGGCCCATCGTTGGCGTTACCCTACTGTTACCATCCATGGCATCGAGGGGGGCTTCTCTGGCCCTGGCTCCAAGACGGTCATCCCTGCTAAGGTCATTGCCAAGTTCTCCATTCGACAGGTCCCCAACATGGACCCAGCAGTGGTCAAGAAACAGGTTACAGACTACCTGAACTCTGTGTTTGCCAAGAGAAAGAGCCCCAACAAGTTGAAGGTGACCATGATCATCGGGGCTAAGCCCTGGTTAGCAGACACCAAGCACCCTCTGTACGAGGCAGGGAAAGCAGCCGTGAAGAGAGTGTTTAACGTGGAGCCAGACCTGATCCGTGAAGGGGGAACCATCCCCATCGCCAAGACCTTTGAGGACGTGACCGGTAAGAGCATCATCATGATGCCCATCGGAGGCTTCGACGATGGCCTCCACTCCCAGAACGAGAAGATGAGCAGGTACAACTACATAGAGGGGACCAAGTTGTTCATCGCGTACCTCCATGAAGTGGCCCATCTCAAGAAGGACTGAGAGCACCTCTTTTCATCACCACCGTTATAAGACAGTTCTATATTGTTTAGCTTGTATGAGATCCCATCAGTGGAGTCTGGCTTTGTTTAGCCTTTTTCCTGACATTAACTGGTAACTTTTCTTGTTTCTTTCCCTCTAAGCAAAACATTCCAGAAACCCTGTGAGTTCTTGGCATCTGATATAGCCTCaacactctgcctctctctctcgctctctctctctctctttctgaatcTTTCTTCCCCCCTCAcgttcctcctttctctctctcaatgtctctctctctctcaatttctctctcatTCACATACAAATGTCTACTTGATAGAGAAAATAAAACTGGTTTGACGCACTA

Function

NR:

description
cytosolic non-specific dipeptidase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021592497.2 True 2125 mRNA 0.50 13 18298739 18311500

Neighbor

gene id symbol gene type direction distance location
LOC110503742 cndp1 coding downstream 6263 18290649 ~ 18292476 (-)
LOC110511708 LOC106579301 coding downstream 13542 18278958 ~ 18285197 (-)
LOC110511716 LOC106579594 coding downstream 50605 18237744 ~ 18248134 (-)
zufsp cf113 coding downstream 79157 18210021 ~ 18219582 (-)
LOC110511774 LOC106579313 coding downstream 91717 18200058 ~ 18207022 (-)
LOC110511626 LOC106579251 coding upstream 42021 18353521 ~ 18359014 (-)
LOC110503735 LOC106605534 coding upstream 293259 18604759 ~ 18623150 (-)
laptm4b LOC106605533 coding upstream 300592 18612092 ~ 18624427 (-)
LOC110511506 lyric coding upstream 313081 18624581 ~ 18633247 (-)
LOC110511375 NA coding upstream 321899 18633399 ~ 18676640 (-)
G231129 NA non-coding downstream 3244 18295274 ~ 18295495 (-)
G231128 NA non-coding downstream 5038 18293475 ~ 18293701 (-)
G231127 NA non-coding downstream 5312 18293142 ~ 18293427 (-)
G231126 NA non-coding downstream 5942 18292579 ~ 18292797 (-)
G231079 NA non-coding downstream 69368 18227984 ~ 18229371 (-)
G231198 NA non-coding upstream 94928 18406428 ~ 18406721 (-)
G231201 NA non-coding upstream 96286 18407786 ~ 18408104 (-)
G231559 NA non-coding upstream 115335 18426835 ~ 18427483 (-)
G231611 NA non-coding upstream 214121 18525621 ~ 18525917 (-)
G231613 NA non-coding upstream 217586 18529086 ~ 18529392 (-)
LOC110503747 lars2 other downstream 167685 18093704 ~ 18154474 (-)
LOC110505118 LOC106579600 other downstream 320830 17975160 ~ 17985544 (-)
G229707 NA other downstream 1250395 17043792 ~ 17048344 (-)
G229380 LOC106605502 other downstream 1448540 16849972 ~ 16850199 (-)
G229373 LOC100194703 other downstream 1458900 16839389 ~ 16839839 (-)
G231652 rn146 other upstream 288230 18599730 ~ 18601875 (-)
LOC110511176 LOC106579058 other upstream 847800 19065512 ~ 19282368 (-)
rims2a LOC106579570 other upstream 1230602 19416054 ~ 19652601 (-)
G232980 NA other upstream 1336586 19648086 ~ 19648629 (-)
G233052 LOC106605397 other upstream 1444704 19756204 ~ 19757908 (-)

Expression


Co-expression Network