XLOC_022000 (FO904943.1)


Basic Information

Item Value
gene id XLOC_022000
gene name FO904943.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 43995820 ~ 44007014 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043519
TCAGATAATCATGTCCTCTCCAAGAAACTCCTCCAACTTTACGCACATCAACCGGTTCGTGCAGCCGCCATGGCGCGTCGCGTTGTGGTCTGTGGCGTTTGCTCTGGTGCTGCTGGTGGCCGTTACCGGGAATTTGATCGTCATCTGGATTATTGTGGCACACAAGCGGATGAGGACCGTCACTAACTACTTTCTTTTAAATCTTGCGGTGTCGGACGTGTGTGTGGCCGCGCTGAACGCGCTGGTGAACTTCGTGTACGGCGCGCATGGGCACTGGTACTTCAGCAGCGCCTACTGCCGCTTCCAGAACTTCTACCCGGTGGCCGCCGTGTTCGCCAGCATCTACTCTATGAGTGCCATCGCCCTGGacagGTATATGGCGATCATCCACCCCATGAAGCCCCGGCTCTCGGCGAAGGTCACGAAAGCGGTGATTGTTTGTGTGTGGATTCTGGCGGCGTTTCTGTCATTTCCTCTCTGCTTCTACTCCGTCACTGAAGTTCTGCCACACAGGACTGTCTGCTATGTGGCCTGGCCGAGAAAAGATGACGACGCATTCATATATCATGTGGTTGTGGCACTGCTGGTGTATCTCCTTCCACTTGCACTGATGGCTGTGACCTACAGCCGAGTCGGACTGACGTTGTGGGGTGGAGATTTCCCAGGACACTCTTCAGAAAACCTCCTGGATCACCTGCAGGCCAAGAGGAAGgTTGTGAAGATGATGGTGATCGTGGTGGTGACGTTCGCCATCTGCTGGCTCCCATACCACGTGTATTTCATCGTGACGAGCTTCAACCGAGCGCTGAGGAGGTTCAAGTGGATCCAGCAGGTGTATCTGTCAGTGCTGTGGCTCTCCATGAGCTCCTCCATGTACAACCCCATCATCTACTGCTGCCTCAACAGCAGGTTCCGCGCCGGGTTCAAGCGGGTGTTTCGCTGGTGTCCCTTCATTCAGATGTCGAACTGTGATGAGCTGGAGCTCCAGACGGCTCGTTTCCAGCAGCAGCGGCAGAGCAGTGTGTTCACGGTCACTCGTATGGAGTCGGACGGCAGCGCCGCCGTCAGCAGACGCAAGAGCTCCAGCACCAGCCGCTGCAGCGTCAGGAGCCAATCACGGCCCTCCGCCCGGCCGCCGCACAATGGAGCTCCACACGGAAACATCAGCTGCGTTCCCGAAACTCTGAGCTGAGAGGAGCAATGAGCAGAGCTGTGGATGCTCCCTAatggaaaaaaactgacattgcaatccACTGTTAACAGTTTCCTGTAGAAACTACAGTAACTCACtggcagcagttcgccagtaacttactgtaaatcaattacagcacaaATATGCATATGTATTACAGTATCTTAGCTcgatttatcttgctgtatatgtatttacagtattgtatatttttgctgtaaatatacagtaatttttacaatgcagctttaaaatacagcaacatactgcATAGCTGTCCTACAGTAAAGCACAGATCACATTACAGTTTAGTTCACCTGTAAATTACTTTAAATCAGTTACAgcagaaatactgtatttacatttacagcacacttttatcttgctgtatatgtatgtatttacagtattgtatgtaTATCTTTGCTGTAAAATACACAGTAATTATAACGATGCAACTTTAAAATGCAGCAACATACCGCATACCTGTCCTACGGTGAAATACAGCTCATATTACAGTTAGATACTTCTTCTAAATACTTCTATCAGTGGAAAGACTTTCCATCTTTTATTACGCAGGATGCTGGAGATTATTGACAGAAGAACATAGAGAAAGGAAGGATTAGCAAAGGGTGCTGTGAGCTCCTCAGTGCTATAATTTCGACTCATAGTTTTGAATcacagttttaattttattatagttttgactAGCTAAGTCATAATTTCAACTTTTCAAGCCATAACATTTTATGTCTTAATATTCACTTTTTAAGTCAATTTCAATTTTATATCAAGTCATTTTGTCTTCATAAGTCTGAATTCTGacttattaaagtaaattataacCTATGCG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000043918

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043519 True 2048 mRNA 0.47 5 43995820 44007014

Neighbor

gene id symbol gene type direction distance location
XLOC_021999 corin coding upstream 6400 43950674 ~ 43989420 (+)
XLOC_021998 CU993818.1 coding upstream 55997 43939124 ~ 43939823 (+)
XLOC_021997 nfxl1 coding upstream 66779 43870886 ~ 43929041 (+)
XLOC_021996 cnga1b coding upstream 129466 43849190 ~ 43866354 (+)
XLOC_021995 si:ch211-149b19.4 coding upstream 152030 43834376 ~ 43843790 (+)
XLOC_022001 txk coding downstream 42495 44049509 ~ 44060455 (+)
XLOC_022002 CABZ01072563.1 coding downstream 63906 44070920 ~ 44075577 (+)
XLOC_022003 G3BP2 coding downstream 71915 44078929 ~ 44110756 (+)
XLOC_022004 tec coding downstream 117124 44124138 ~ 44146690 (+)
XLOC_022005 si:ch73-106g13.1 coding downstream 150668 44157682 ~ 44180795 (+)
XLOC_021987 NA non-coding upstream 363219 43631945 ~ 43632601 (+)
XLOC_021984 BX322612.1 non-coding upstream 660245 43335460 ~ 43335575 (+)
XLOC_021983 CR545469.2 non-coding upstream 700861 43288994 ~ 43294959 (+)
XLOC_021980 NA non-coding upstream 932229 43060401 ~ 43063591 (+)
XLOC_022007 NA non-coding downstream 256905 44263919 ~ 44266197 (+)
XLOC_022011 NA non-coding downstream 454258 44461272 ~ 44462528 (+)
XLOC_022013 NA non-coding downstream 520860 44527874 ~ 44654032 (+)
XLOC_022015 NA non-coding downstream 559928 44566942 ~ 44577390 (+)

Expression


Co-expression Network