G255346


Basic Information

Item Value
gene id G255346
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 39647819 ~ 39648901 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290916
GGGCAAGACAACACAAAATATTTAAATCAATACACATTTTTTACCTACATTGACTGTACCTGAATGGGTTCAAACAAGGCTGGCCAGCTATCTTTGAAGTCCTTCACAGGAAGGGCCTGAATGACATCTTGTCTTCGATATGAGAAGGTCCTTGCCATTTTGGCACTCACAATGTTGTGGTTGTCACGTATTTGTACTTCTCCCAGTAGCTCCACTCGCTCCCTCTCCAGGGTCTCATCTGTTTCTCCAGCAGGGTGGGGTGGGAGGTCATTTACCTCCGCcttctttgttttgtttatgTTCTTGGCAACGGGCTTGTCCTCTGGTGATTTTCTCTTGACAGAGTTCACTTCCAGTTCTAGGCAACCAATTCCTCTCAGTTTCGATCTGTAATTGCCCATCTTGTACTTTCGGCTGGTTTGCCATCCGTACAGGCCTGAGAAGGACCCAAGCTCTTTAAGACATGGGTGTTTTTTTTACCAAAGCTTCTGCAACCTGCCAAATTTGTAGACTTGACGGATAGGCTCTAAACTGGAAGATCCTTTCAGACAGTTTTTCCAGGATGTCTGATTTCACAGGCAGATTGTTGAGTAGTGTTCCATCCTTCATGTGTGCTTCATTAGCTGCCTCAAGAATGAGCTCTGTATCATAAGCAAAGCGAGGAACTTCAAACTCAGATGGCCACGGACTGGAGCGTTGGGAAGAGGTACTTTCTGGAGAGGACAATATCACAGTATCACGTGATCCAAGGCAGCACCTCTCATCTGATGTATCTGTGGAGATGTTATTGAGTTCTTGTACATTTAAAGTAATAAGAGGTGGGCCGTCAAGGTCAACCACTTTGATGGTGTCTTTATCCTTTAGGTCTTCAGTATCAAGCAAAGAAAATAACTGATCTCCATATGCACTCTCCATGTATTgtagaacaaattatttttgaaGCTGAAATGTCTCTTGCACAATTGTGCCAAGCTCAGCCACAGTAGCAGGGATTCCAAAAGGCAATGTTAGCTTACGGATATCAGGGGCCCTCCAATAGGACCCGTAGCCTGATGTTTCTGTTCTGTTGTAGCGAAAGTGATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290916 True 1083 lncRNA 0.44 1 39647819 39648901

Neighbor

gene id symbol gene type direction distance location
LOC110519956 LOC105026395 coding upstream 26741 39608169 ~ 39621078 (+)
trnaf-gaa NA coding upstream 254106 39393641 ~ 39393713 (+)
LOC110519950 LOC106586053 coding upstream 433715 39171897 ~ 39214104 (+)
LOC110519946 NA coding upstream 887329 38635946 ~ 38760490 (+)
LOC110519944 LOC106586047 coding upstream 1397797 38234343 ~ 38250022 (+)
LOC110519960 LOC106586058 coding downstream 9852 39658753 ~ 39668297 (+)
LOC110519963 LOC106586016 coding downstream 57540 39706441 ~ 39709665 (+)
LOC110519964 LOC106586025 coding downstream 64789 39713690 ~ 39741849 (+)
LOC110519965 LOC106586023 coding downstream 96873 39745774 ~ 39769426 (+)
asmtl asmtl coding downstream 120862 39769763 ~ 39782404 (+)
G255344 NA non-coding upstream 924 39646691 ~ 39646895 (+)
G255262 NA non-coding upstream 123795 39503531 ~ 39524024 (+)
G255195 NA non-coding upstream 237517 39408279 ~ 39410302 (+)
G255115 NA non-coding upstream 377854 39269618 ~ 39269965 (+)
G254870 NA non-coding upstream 391062 39255652 ~ 39256757 (+)
G255348 NA non-coding downstream 4287 39653188 ~ 39653459 (+)
G255349 NA non-coding downstream 5355 39654256 ~ 39654503 (+)
G255355 NA non-coding downstream 21203 39670104 ~ 39670733 (+)
G255357 NA non-coding downstream 22406 39671307 ~ 39671526 (+)
G255407 NA non-coding downstream 138102 39787003 ~ 39787277 (+)
G254816 NA other upstream 803263 38843510 ~ 38844556 (+)
G254445 NA other upstream 1046953 38600487 ~ 38600866 (+)
G254204 NA other upstream 1206085 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 1555085 38092322 ~ 38092734 (+)
G253299 NA other upstream 1920481 37726948 ~ 37727338 (+)
LOC110519969 LOC106586020 other downstream 791168 40440040 ~ 40452542 (+)
G261749 NA other downstream 4603168 44252069 ~ 44252551 (+)
G262037 NA other downstream 4871518 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 6190020 45838921 ~ 45839480 (+)

Expression


Co-expression Network