G255355


Basic Information

Item Value
gene id G255355
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 39670104 ~ 39670733 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290925
AGGTAGTCGTCCAGCGCGGTATGTGAGTCTTTGTTGGACGGGCTGGAGACGTTGGCCGATTGGTCATCGTGTAACCAGTAAAATTCTGTACTTTATtatggcactggaagattttgactttcacaaacactggtaagatGGCTGACTGCCACCACGAGAGGACAGGACTTGgaatctgagtggtgaaggcgatgaactacaTGTGTgaattataacaccaacctcttctcttatttcctctcttacatggccccacattaATATAGaatccctgcacaatcctagagcgactgataggattcaggtattgaagaatagcattagcaagggcaacctcaatggtaggatttgaaccgacacctcaacacacttattCAAGCACTTGAGCACTCGGcctgacaacacatttgttaaatgtctcgatgggatcgacccattgctctgcctaactttcattgatttcaatcaagggtttacatacagcaactacagttttttaaggtcatttgccacgtgGATATTATAGGATGAGGTGGCTGAGTGATTAAGGCGATGAACTACTAATATTAAAAATtactctccagaaataagtctctcactgttgccgcctgctaccgaccaccctcagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290925 True 630 lncRNA 0.44 1 39670104 39670733

Neighbor

gene id symbol gene type direction distance location
LOC110519960 LOC106586058 coding upstream 1807 39658753 ~ 39668297 (+)
LOC110519956 LOC105026395 coding upstream 49026 39608169 ~ 39621078 (+)
trnaf-gaa NA coding upstream 276391 39393641 ~ 39393713 (+)
LOC110519950 LOC106586053 coding upstream 456000 39171897 ~ 39214104 (+)
LOC110519946 NA coding upstream 909614 38635946 ~ 38760490 (+)
LOC110519963 LOC106586016 coding downstream 35708 39706441 ~ 39709665 (+)
LOC110519964 LOC106586025 coding downstream 42957 39713690 ~ 39741849 (+)
LOC110519965 LOC106586023 coding downstream 75041 39745774 ~ 39769426 (+)
asmtl asmtl coding downstream 99030 39769763 ~ 39782404 (+)
LOC110519969 LOC106586020 coding downstream 769307 40440040 ~ 40452542 (+)
G255349 NA non-coding upstream 15601 39654256 ~ 39654503 (+)
G255348 NA non-coding upstream 16645 39653188 ~ 39653459 (+)
G255346 NA non-coding upstream 21203 39647819 ~ 39648901 (+)
G255344 NA non-coding upstream 23209 39646691 ~ 39646895 (+)
G255262 NA non-coding upstream 146080 39503531 ~ 39524024 (+)
G255357 NA non-coding downstream 574 39671307 ~ 39671526 (+)
G255407 NA non-coding downstream 116270 39787003 ~ 39787277 (+)
G255433 NA non-coding downstream 147607 39818340 ~ 39818548 (+)
G255434 NA non-coding downstream 148887 39819620 ~ 39819944 (+)
G255442 NA non-coding downstream 157087 39827820 ~ 39828046 (+)
G254816 NA other upstream 825548 38843510 ~ 38844556 (+)
G254445 NA other upstream 1069238 38600487 ~ 38600866 (+)
G254204 NA other upstream 1228370 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 1577370 38092322 ~ 38092734 (+)
G261749 NA other downstream 4581336 44252069 ~ 44252551 (+)
G262037 NA other downstream 4849686 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 6168188 45838921 ~ 45839480 (+)
G263710 NA other downstream 6263386 45934119 ~ 45934418 (+)

Expression


Co-expression Network