G255433


Basic Information

Item Value
gene id G255433
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 39818340 ~ 39818548 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU291027
GTGCATCTGCCTTAACGttttgggaacctggtctgtacgAAAGGGCgaaaacaaaacgggtgaaaaacatggcccaccttgcgtggcgagggttcagtctcctcgctgcccagatgtactccagattgcagtggtcagtccagatgagaaaagggtgtttagccccttcaagccaatgtctccacaccttcaaggCCTTGACTACAGCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU291027 True 209 lncRNA 0.53 1 39818340 39818548

Neighbor

gene id symbol gene type direction distance location
asmtl asmtl coding upstream 35936 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 48914 39745774 ~ 39769426 (+)
LOC110519964 LOC106586025 coding upstream 76491 39713690 ~ 39741849 (+)
LOC110519963 LOC106586016 coding upstream 108675 39706441 ~ 39709665 (+)
LOC110519960 LOC106586058 coding upstream 150043 39658753 ~ 39668297 (+)
LOC110519969 LOC106586020 coding downstream 621492 40440040 ~ 40452542 (+)
dnah7 dnah7 coding downstream 642613 40461161 ~ 40702678 (+)
LOC118944668 NA coding downstream 1039749 40858297 ~ 40861180 (+)
LOC110519971 tmeff2 coding downstream 1735923 41554471 ~ 41725755 (+)
LOC110519972 sdpr coding downstream 1921542 41740090 ~ 41767612 (+)
G255407 NA non-coding upstream 31063 39787003 ~ 39787277 (+)
G255357 NA non-coding upstream 146814 39671307 ~ 39671526 (+)
G255355 NA non-coding upstream 147607 39670104 ~ 39670733 (+)
G255349 NA non-coding upstream 163837 39654256 ~ 39654503 (+)
G255348 NA non-coding upstream 164881 39653188 ~ 39653459 (+)
G255434 NA non-coding downstream 1072 39819620 ~ 39819944 (+)
G255442 NA non-coding downstream 9272 39827820 ~ 39828046 (+)
G255444 NA non-coding downstream 11049 39829597 ~ 39829905 (+)
G255445 NA non-coding downstream 12638 39831186 ~ 39831480 (+)
G255447 NA non-coding downstream 13571 39832119 ~ 39832372 (+)
G254816 NA other upstream 973784 38843510 ~ 38844556 (+)
G254445 NA other upstream 1217474 38600487 ~ 38600866 (+)
G254204 NA other upstream 1376606 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 1725606 38092322 ~ 38092734 (+)
G261749 NA other downstream 4433521 44252069 ~ 44252551 (+)
G262037 NA other downstream 4701871 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 6020373 45838921 ~ 45839480 (+)
G263710 NA other downstream 6115571 45934119 ~ 45934418 (+)

Expression


Co-expression Network