G255357


Basic Information

Item Value
gene id G255357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 39671307 ~ 39671526 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290927
caatagcattgaatagtccccgcgatatgcaactgttcagggaagtcaggaaccaatacacgcagtcaggtattgaagaataggccagcttcttcaggcagaaatttgcatcctgtagctttaactccaaaaagttgtgggacactgtaaagtccatggagaacaagagcacctcctcccagctacccactgcactgaggctaggtaacaagGTCACCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290927 True 220 lncRNA 0.48 1 39671307 39671526

Neighbor

gene id symbol gene type direction distance location
LOC110519960 LOC106586058 coding upstream 3010 39658753 ~ 39668297 (+)
LOC110519956 LOC105026395 coding upstream 50229 39608169 ~ 39621078 (+)
trnaf-gaa NA coding upstream 277594 39393641 ~ 39393713 (+)
LOC110519950 LOC106586053 coding upstream 457203 39171897 ~ 39214104 (+)
LOC110519946 NA coding upstream 910817 38635946 ~ 38760490 (+)
LOC110519963 LOC106586016 coding downstream 34915 39706441 ~ 39709665 (+)
LOC110519964 LOC106586025 coding downstream 42164 39713690 ~ 39741849 (+)
LOC110519965 LOC106586023 coding downstream 74248 39745774 ~ 39769426 (+)
asmtl asmtl coding downstream 98237 39769763 ~ 39782404 (+)
LOC110519969 LOC106586020 coding downstream 768514 40440040 ~ 40452542 (+)
G255355 NA non-coding upstream 574 39670104 ~ 39670733 (+)
G255349 NA non-coding upstream 16804 39654256 ~ 39654503 (+)
G255348 NA non-coding upstream 17848 39653188 ~ 39653459 (+)
G255346 NA non-coding upstream 22406 39647819 ~ 39648901 (+)
G255344 NA non-coding upstream 24412 39646691 ~ 39646895 (+)
G255407 NA non-coding downstream 115477 39787003 ~ 39787277 (+)
G255433 NA non-coding downstream 146814 39818340 ~ 39818548 (+)
G255434 NA non-coding downstream 148094 39819620 ~ 39819944 (+)
G255442 NA non-coding downstream 156294 39827820 ~ 39828046 (+)
G255444 NA non-coding downstream 158071 39829597 ~ 39829905 (+)
G254816 NA other upstream 826751 38843510 ~ 38844556 (+)
G254445 NA other upstream 1070441 38600487 ~ 38600866 (+)
G254204 NA other upstream 1229573 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 1578573 38092322 ~ 38092734 (+)
G261749 NA other downstream 4580543 44252069 ~ 44252551 (+)
G262037 NA other downstream 4848893 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 6167395 45838921 ~ 45839480 (+)
G263710 NA other downstream 6262593 45934119 ~ 45934418 (+)

Expression


Co-expression Network