Gene
RNA
| Item | Value |
|---|---|
| gene id | G260366 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 43224847 ~ 43225135 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU296308 | True | 289 | lncRNA | 0.36 | 1 | 43224847 | 43225135 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519989 | LOC106581699 | coding | upstream | 141087 | 43051602 ~ 43083760 (+) |
| LOC110519992 | LOC106586087 | coding | upstream | 280250 | 42895618 ~ 42944597 (+) |
| LOC110519980 | nckap5 | coding | upstream | 341525 | 42746657 ~ 42883322 (+) |
| LOC110519990 | stk17b | coding | upstream | 509019 | 42696546 ~ 42715828 (+) |
| LOC110519981 | hecw2 | coding | upstream | 542791 | 42616569 ~ 42682056 (+) |
| LOC110519994 | LOC100380648 | coding | downstream | 605826 | 43830961 ~ 43845629 (+) |
| LOC110519995 | LOC106586118 | coding | downstream | 631954 | 43857089 ~ 43875820 (+) |
| LOC110519997 | lct | coding | downstream | 651129 | 43876264 ~ 43895648 (+) |
| LOC118956122 | NA | coding | downstream | 717989 | 43943124 ~ 43986958 (+) |
| LOC110504116 | LOC106586120 | coding | downstream | 850687 | 44075822 ~ 44208107 (+) |
| G260062 | NA | non-coding | upstream | 204874 | 43019420 ~ 43019973 (+) |
| G259974 | NA | non-coding | upstream | 276994 | 42944651 ~ 42947853 (+) |
| G259003 | NA | non-coding | upstream | 394602 | 42829759 ~ 42830245 (+) |
| G258961 | NA | non-coding | upstream | 458144 | 42766499 ~ 42766703 (+) |
| G260375 | NA | non-coding | downstream | 11120 | 43236255 ~ 43236469 (+) |
| G260432 | NA | non-coding | downstream | 98460 | 43323595 ~ 43417280 (+) |
| G260544 | NA | non-coding | downstream | 293905 | 43519040 ~ 43522754 (+) |
| G261123 | NA | non-coding | downstream | 540074 | 43765209 ~ 43804202 (+) |
| G261150 | NA | non-coding | downstream | 580178 | 43805313 ~ 43805535 (+) |
| LOC110519969 | LOC106586020 | other | upstream | 2772667 | 40440040 ~ 40452542 (+) |
| LOC110519960 | LOC106586058 | other | upstream | 3556759 | 39658753 ~ 39668297 (+) |
| G254816 | NA | other | upstream | 4380291 | 38843510 ~ 38844556 (+) |
| G254445 | NA | other | upstream | 4623981 | 38600487 ~ 38600866 (+) |
| G254204 | NA | other | upstream | 4783113 | 38441166 ~ 38441734 (+) |
| G261749 | NA | other | downstream | 1026934 | 44252069 ~ 44252551 (+) |
| G262037 | NA | other | downstream | 1295284 | 44520419 ~ 44525408 (+) |
| G263547 | LOC106586150 | other | downstream | 2613786 | 45838921 ~ 45839480 (+) |
| G263710 | NA | other | downstream | 2708984 | 45934119 ~ 45934418 (+) |
| G263733 | LOC106586158 | other | downstream | 2850349 | 46075484 ~ 46079425 (+) |
