G259003


Basic Information

Item Value
gene id G259003
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 42829759 ~ 42830245 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU294845
gttgtggacaggtgtcttttatactgagttatacaagttcaaacaggtgccattaatacaggtaacgagtggaggacagaggagcctcttaaagaagaagttacaggtctgtgagagacagaaatcttgcttgtttgtaggtgaccaaatacttatttacctccaaaatttgcaaataaattcataaaaaatcctacaatgtgatttctggattttttccccctaattttgtctgtcatagttgaagtgtacctatgatgaaaattacaggcctctctcatatttttaagtgggagaacttgcacagttggtggctgactaaatacttttttgccccactgtatgtatgtatatatatatatatatatatatatatataaataaataatgccACAATGAATAAATACACAGTAAATGATGAGTAAAATGACGAGTACAAATTACatggctacagtgccttgcgaaagtattcggcccccttgaactt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU294845 True 487 lncRNA 0.35 1 42829759 42830245

Neighbor

gene id symbol gene type direction distance location
LOC110519990 stk17b coding upstream 113931 42696546 ~ 42715828 (+)
LOC110519981 hecw2 coding upstream 147703 42616569 ~ 42682056 (+)
pgap1 pgap1 coding upstream 239393 42562140 ~ 42590366 (+)
LOC110519991 cssa25h2orf47 coding upstream 279138 42543621 ~ 42550621 (+)
LOC110519988 LOC106586103 coding upstream 295605 42461537 ~ 42534154 (+)
LOC110519992 LOC106586087 coding downstream 65373 42895618 ~ 42944597 (+)
LOC110519989 LOC106581699 coding downstream 221357 43051602 ~ 43083760 (+)
LOC110519984 LOC106586113 coding downstream 339540 43169785 ~ 43513887 (+)
LOC110519994 LOC100380648 coding downstream 1000716 43830961 ~ 43845629 (+)
LOC110519995 LOC106586118 coding downstream 1026844 43857089 ~ 43875820 (+)
G258961 NA non-coding upstream 63056 42766499 ~ 42766703 (+)
G258877 NA non-coding upstream 215614 42612387 ~ 42614145 (+)
G258824 NA non-coding upstream 263651 42493455 ~ 42566108 (+)
G258784 NA non-coding upstream 385641 42443864 ~ 42444118 (+)
G259974 NA non-coding downstream 114406 42944651 ~ 42947853 (+)
G260062 NA non-coding downstream 189175 43019420 ~ 43019973 (+)
G260366 NA non-coding downstream 394602 43224847 ~ 43225135 (+)
G260375 NA non-coding downstream 406010 43236255 ~ 43236469 (+)
G260432 NA non-coding downstream 493350 43323595 ~ 43417280 (+)
LOC110519969 LOC106586020 other upstream 2377579 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 3161671 39658753 ~ 39668297 (+)
G254816 NA other upstream 3985203 38843510 ~ 38844556 (+)
G254445 NA other upstream 4228893 38600487 ~ 38600866 (+)
G254204 NA other upstream 4388025 38441166 ~ 38441734 (+)
G261749 NA other downstream 1421824 44252069 ~ 44252551 (+)
G262037 NA other downstream 1690174 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 3008676 45838921 ~ 45839480 (+)
G263710 NA other downstream 3103874 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 3245239 46075484 ~ 46079425 (+)

Expression


Co-expression Network