G260375


Basic Information

Item Value
gene id G260375
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 43236255 ~ 43236469 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU296317
ataatatactttttacaccatacattttccctgacacgcaaaagtactcgttacattttgacaggaaaattgtccaatacacacttataaagagaacatccctggtcatccctactgcatttcatctggcagactcactaagcacaaatgcttcatttgtaaattatgtctgaatatTGGAGTGTGCCccgtaaataaaaacatttacttttgat

Function

NR:

description
hypothetical protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU296317 True 215 lncRNA 0.35 1 43236255 43236469

Neighbor

gene id symbol gene type direction distance location
LOC110519989 LOC106581699 coding upstream 152495 43051602 ~ 43083760 (+)
LOC110519992 LOC106586087 coding upstream 291658 42895618 ~ 42944597 (+)
LOC110519980 nckap5 coding upstream 352933 42746657 ~ 42883322 (+)
LOC110519990 stk17b coding upstream 520427 42696546 ~ 42715828 (+)
LOC110519981 hecw2 coding upstream 554199 42616569 ~ 42682056 (+)
LOC110519994 LOC100380648 coding downstream 594492 43830961 ~ 43845629 (+)
LOC110519995 LOC106586118 coding downstream 620620 43857089 ~ 43875820 (+)
LOC110519997 lct coding downstream 639795 43876264 ~ 43895648 (+)
LOC118956122 NA coding downstream 706655 43943124 ~ 43986958 (+)
LOC110504116 LOC106586120 coding downstream 839353 44075822 ~ 44208107 (+)
G260366 NA non-coding upstream 11120 43224847 ~ 43225135 (+)
G260062 NA non-coding upstream 216282 43019420 ~ 43019973 (+)
G259974 NA non-coding upstream 288402 42944651 ~ 42947853 (+)
G259003 NA non-coding upstream 406010 42829759 ~ 42830245 (+)
G258961 NA non-coding upstream 469552 42766499 ~ 42766703 (+)
G260432 NA non-coding downstream 87126 43323595 ~ 43417280 (+)
G260544 NA non-coding downstream 282571 43519040 ~ 43522754 (+)
G261123 NA non-coding downstream 528740 43765209 ~ 43804202 (+)
G261150 NA non-coding downstream 568844 43805313 ~ 43805535 (+)
G261156 NA non-coding downstream 573660 43810129 ~ 43810402 (+)
LOC110519969 LOC106586020 other upstream 2784075 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 3568167 39658753 ~ 39668297 (+)
G254816 NA other upstream 4391699 38843510 ~ 38844556 (+)
G254445 NA other upstream 4635389 38600487 ~ 38600866 (+)
G254204 NA other upstream 4794521 38441166 ~ 38441734 (+)
G261749 NA other downstream 1015600 44252069 ~ 44252551 (+)
G262037 NA other downstream 1283950 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 2602452 45838921 ~ 45839480 (+)
G263710 NA other downstream 2697650 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 2839015 46075484 ~ 46079425 (+)

Expression


Co-expression Network