G263935


Basic Information

Item Value
gene id G263935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 46296146 ~ 46296372 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU300074
CATGCAAGGACACGGATATTTGATTCAATGTAAAACcatttgtgactcgtttcaggaaattAGGCGTATGTcgcgcgtcactacttcacaggataGCCATTTGCATGTAAACTTTttattttatcaaaatgcgtttttggggtagaaatgccttctggaacatgtgaacttttatGTGCCTTAATTACACACTTGTacgccatctgtaaatatgaataaaattgtta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300074 True 227 lncRNA 0.36 1 46296146 46296372

Neighbor

gene id symbol gene type direction distance location
LOC118957146 NA coding upstream 252301 46032765 ~ 46043845 (+)
LOC110520034 LOC106586154 coding upstream 285499 46008199 ~ 46010647 (+)
LOC110520033 LOC106586153 coding upstream 363124 45903665 ~ 45933022 (+)
LOC110504149 wnt6 coding upstream 411952 45852182 ~ 45884194 (+)
asic4a LOC106586149 coding upstream 472845 45726237 ~ 45823301 (+)
LOC110520040 LOC106586160 coding downstream 45476 46341848 ~ 46441801 (+)
LOC110504152 LOC106586162 coding downstream 162218 46458590 ~ 46544295 (+)
LOC110520045 LOC106586166 coding downstream 427683 46724055 ~ 46777392 (+)
LOC110520046 LOC106586167 coding downstream 504686 46801058 ~ 46832288 (+)
LOC110504153 gpd2 coding downstream 724623 47020995 ~ 47027946 (+)
G263931 NA non-coding upstream 5957 46289904 ~ 46290189 (+)
G263897 NA non-coding upstream 57444 46238462 ~ 46238702 (+)
G263891 NA non-coding upstream 64490 46231412 ~ 46231656 (+)
G263883 LOC107671282 non-coding upstream 73531 46222368 ~ 46222615 (+)
G263882 LOC106581831 non-coding upstream 74436 46221241 ~ 46221710 (+)
G263937 NA non-coding downstream 4330 46300702 ~ 46300925 (+)
G263939 NA non-coding downstream 5863 46302235 ~ 46302454 (+)
G263944 NA non-coding downstream 11984 46308356 ~ 46308573 (+)
G263952 NA non-coding downstream 22576 46318948 ~ 46319200 (+)
G263962 NA non-coding downstream 40666 46337038 ~ 46337776 (+)
G263859 LOC107588258 other upstream 111342 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 216721 46075484 ~ 46079425 (+)
G263710 NA other upstream 361728 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 456666 45838921 ~ 45839480 (+)
G262037 NA other upstream 1770738 44520419 ~ 44525408 (+)
G267358 NA other downstream 3214431 49510803 ~ 49512475 (+)
G267381 NA other downstream 3258126 49554498 ~ 49555838 (+)
G267529 NA other downstream 3540245 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 3865929 50162278 ~ 50184327 (+)

Expression


Co-expression Network