G263962


Basic Information

Item Value
gene id G263962
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 46337038 ~ 46337776 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU300101
gttgcaacactcactaccgagttccaaactgcctctggaagcaacgtcaacacaataactgttcgtcggaagcttaatgaaatgggtttccagcagccacacacaagcctaagaacaccatgcgcaatgccaagcatcggctggagtggtgtaaagctcgccgccattggactctggagcagtggaaacgcattctctggagtgatgaatcacgcttcaccatctggcagtccgacagacaaatctgggtttggcggatgccaggagaacgctacctgccccaatgcatagtgccaactgtaaagtttagtgggtgaggaataatggtcttgggttgtttttcatggtttgggctaggtcccttagttccaatgaagatAAATCGTAATGCtatagcatacaattacattctagacaattctgtgcttccaactttgtggcaacagtttggggaagaccctttcctgtttcagcatgacaatgcccccgtgcacaaagtgaggtccattcagaaatggGTTGTTGAGATCGGGGTGGAAGAAattgattggcctgcacagagccatgacctcaaacccatcaaatacttttggaatgaattggaacgctgactgcgagtcAGACCtaaatcggccaacatcagtgcccgacctcactaatgctcttgttgctgaatggaagcaagttcccgcagcaatgttccaacatctagtggaaagccttcccagaagagtggagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300101 True 739 lncRNA 0.48 1 46337038 46337776

Neighbor

gene id symbol gene type direction distance location
LOC118957146 NA coding upstream 293193 46032765 ~ 46043845 (+)
LOC110520034 LOC106586154 coding upstream 326391 46008199 ~ 46010647 (+)
LOC110520033 LOC106586153 coding upstream 404016 45903665 ~ 45933022 (+)
LOC110504149 wnt6 coding upstream 452844 45852182 ~ 45884194 (+)
asic4a LOC106586149 coding upstream 513737 45726237 ~ 45823301 (+)
LOC110520040 LOC106586160 coding downstream 4072 46341848 ~ 46441801 (+)
LOC110504152 LOC106586162 coding downstream 120814 46458590 ~ 46544295 (+)
LOC110520045 LOC106586166 coding downstream 386279 46724055 ~ 46777392 (+)
LOC110520046 LOC106586167 coding downstream 463282 46801058 ~ 46832288 (+)
LOC110504153 gpd2 coding downstream 683219 47020995 ~ 47027946 (+)
G263952 NA non-coding upstream 17838 46318948 ~ 46319200 (+)
G263944 NA non-coding upstream 28465 46308356 ~ 46308573 (+)
G263939 NA non-coding upstream 34584 46302235 ~ 46302454 (+)
G263937 NA non-coding upstream 36113 46300702 ~ 46300925 (+)
G263935 NA non-coding upstream 40666 46296146 ~ 46296372 (+)
G264067 NA non-coding downstream 238952 46576728 ~ 46617406 (+)
G264229 NA non-coding downstream 527568 46865344 ~ 46865560 (+)
G264230 NA non-coding downstream 529061 46866837 ~ 46867059 (+)
G264255 NA non-coding downstream 572614 46910390 ~ 46910659 (+)
G264259 NA non-coding downstream 578642 46916418 ~ 46917336 (+)
G263859 LOC107588258 other upstream 152234 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 257613 46075484 ~ 46079425 (+)
G263710 NA other upstream 402620 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 497558 45838921 ~ 45839480 (+)
G262037 NA other upstream 1811630 44520419 ~ 44525408 (+)
G267358 NA other downstream 3173027 49510803 ~ 49512475 (+)
G267381 NA other downstream 3216722 49554498 ~ 49555838 (+)
G267529 NA other downstream 3498841 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 3824525 50162278 ~ 50184327 (+)

Expression


Co-expression Network