XLOC_022341


Basic Information

Item Value
gene id XLOC_022341
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 23193876 ~ 23253795 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045006
aacggTTTCAAACTGACAACATTACCAAATAATGattataaactatttttattttattttagcaacaAAATTCTGTCTTAGTTCCGATTCGGGTATGTGTTTTCGTAAAATTTAGGTCTTTTCGCCTTTCGCTTTAAGGCTAACGTTGGCGTCATATGAGGCTTTCAGATGAGCAACCAAAGGCCCTGAGCCCCAAAGTAAGCCTGTGTCCGGTGTGGTGAAGTTCCAGGCAGAGGCTGAATCATCCTGTTATCCTGCTCCAACTCCCATATGTTATCATAGTCCATTTCCAGGTCATCTGGCTCCACCGGCTGAAGAGCGGCTATGAGACGTCTTGAAGGATCTCCCACATGTGAGCTTTAAATCACTCTCAGTGGTTGTACAAGTAATCCACCCATGAAGGTCAAGATGTTGGATCTTGAAGAGCTCTTACCTGACAGGGCATGTGTTGCAGTTTGACTTTGGTGACaCCTACGGCAAACAGAACTGGGCTGGCTCCTTCGCAGCGGCGTGGTCGTGTACGACTGTTACTGAGCACACCCCTCTGCTCGGGCATCAGGTGATACTTCAGCGCCTCGATCAGCAGGTCTTTGCACTCAGAGTGGTGACGTACCAGCAGCTCCGTATCCACGTTACTCATCAGGAAGTCCCGTGTAAGCAGGGGCAGACGCACACACTTCATCAGCTAAAGAGACGTGGATGGAAATAGTAAGAgCAGATCACTCACCTGTTTGAGAGGCAGCAGCATGAACTCCTCAGTTTTGGATACCTCTACAAAGTGCTGCAGGACGTACTTATGAGCTGACTTAAGAAGGTCGCTGCAGGAGTGAGTGTCTGCAAAGCCGCGGATGCCCAGGCAGTTTGAGGGGTCCAGCTGGCTGAGGAGGAATTTACAGCAGGCATCTCTCACTCCATTGAGCTGCAGAAGACTTGCTGCCGGCAACAGGGTCTGCTCCAGACAAGATACAGAGGGTCAAACAAAACTCATGTTGTAAGACATCATCAAACTCATttacatcatttttaaaaaaatcagtatTTGTGTACGATTTTCACAGTACTTCTCATGCtcatgcaaatatgtctgatataATCTGTCAATCCATAtcctttgcaaatatttgagaaatacaAGAAAATGAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045006 True 1143 lncRNA 0.46 6 23193876 23253795

Neighbor

gene id symbol gene type direction distance location
XLOC_022340 noc2l coding downstream 14459 23126130 ~ 23179417 (-)
XLOC_022339 NA coding downstream 169881 23012288 ~ 23023995 (-)
XLOC_022338 AL954857.1 coding downstream 330305 22863457 ~ 22863571 (-)
XLOC_022337 ca6 coding downstream 542884 22634442 ~ 22650992 (-)
XLOC_022336 CR388207.2 coding downstream 570761 22578482 ~ 22623115 (-)
XLOC_022342 si:dkey-98j1.5 coding upstream 1181 23254976 ~ 23256726 (-)
XLOC_022343 NA coding upstream 125670 23379465 ~ 23449083 (-)
XLOC_022344 CR925720.1 coding upstream 792237 24046032 ~ 24047054 (-)
XLOC_022345 NA coding upstream 803615 24057410 ~ 24115957 (-)
XLOC_022346 arhgef19 coding upstream 886248 24140043 ~ 24167350 (-)
XLOC_022335 NA non-coding downstream 595874 22558562 ~ 22598002 (-)
XLOC_022333 NA non-coding downstream 977748 22212125 ~ 22216128 (-)
XLOC_022332 NA non-coding downstream 1042086 22139777 ~ 22151790 (-)
XLOC_022348 NA non-coding upstream 930726 24184521 ~ 24187176 (-)
XLOC_022358 NA non-coding upstream 1242358 24496153 ~ 24500128 (-)
XLOC_022359 NA non-coding upstream 1254059 24507854 ~ 24508822 (-)

Expression


Co-expression Network