XLOC_022332



Basic Information


Item Value
gene id XLOC_022332
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 22139777 ~ 22151790 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044733
atgcttgttaaataatattttgttcaATAATACTCATCAAATAAATTCAATatcaatataattaatattatatttatctcCTTGGTCTTTCTGTAGAACCATATATTCAGCTAAAGatcttctttaatattctactgacaaaaaaagtcacctacatcttggataacctgaggAGCACTTCAGCACACTCAACACAGATGGGAAGGGAAACCCTGCCCAAATCAGCCCCTTTGCCTACTTGAAAACGCCACAACTACACATGAGGTAAAGTGGATGCTTTTTATATGCTAAATA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044733 True 294 lncRNA 0.33 2 22139777 22151790

Neighbor


gene id symbol gene type direction distance location
XLOC_022331 phc2a coding downstream 8999 22063484 ~ 22130778 (-)
XLOC_022330 si:dkey-68l7.2 coding downstream 182394 21955056 ~ 21957383 (-)
XLOC_022329 ephb2a coding downstream 193118 21803410 ~ 21946659 (-)
XLOC_022328 lrrc38a coding downstream 342260 21775436 ~ 21797517 (-)
XLOC_022327 vps13d coding downstream 376179 21696560 ~ 21763598 (-)
XLOC_022333 NA coding upstream 60335 22212125 ~ 22216128 (-)
XLOC_022334 spsb1 coding upstream 344524 22496314 ~ 22523303 (-)
XLOC_022335 NA coding upstream 406772 22558562 ~ 22598002 (-)
XLOC_022336 CR388207.2 coding upstream 426692 22578482 ~ 22623115 (-)
XLOC_022337 ca6 coding upstream 482652 22634442 ~ 22650992 (-)
XLOC_022325 NA non-coding downstream 444716 21654274 ~ 21695061 (-)
XLOC_022326 CR548634.1 non-coding downstream 447354 21683776 ~ 21692423 (-)
XLOC_022324 NA non-coding downstream 489902 21646702 ~ 21649875 (-)
XLOC_022316 NA non-coding downstream 1131823 21004206 ~ 21007954 (-)
XLOC_022315 NA non-coding downstream 1201199 20858313 ~ 20938578 (-)
XLOC_022338 AL954857.1 non-coding upstream 711667 22863457 ~ 22863571 (-)
XLOC_022339 NA non-coding upstream 860498 23012288 ~ 23023995 (-)
XLOC_022341 NA non-coding upstream 1042086 23193876 ~ 23253795 (-)

Expression



Co-expression Network