XLOC_022326 (CR548634.1)


Basic Information

Item Value
gene id XLOC_022326
gene name CR548634.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 21683776 ~ 21692423 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044064
GGATGGCGGTACTGCACCctgacacacacttacacactctgGCTACTGCACATGCGCAGATCTCATAAATGAATCCGACTTTAATCAACTTAATTAAGATCTATCATCAAATTAATCGAATTTTCGGAGGCCGGGGTGGAGTGCATGAGCCGCGGTCAGACAGTCACCAATCACCGTGCGGCTAAATGGATCGACGGAggataaaaccattaaaagatgCGGAGAAACACATCACCAGCTCCACCGACAAGACCCATTCACTGGAAACCGAATATATAGAAGGTTACTAAGTTTTGCAGCATTGATGCCGATCATGAGGACGAGACCCTCGGCCGGCTGGTGAATGATGACCATCTGCACCCTAACTGCACTGTCAATAAGATCGTTGTTCAGAGAAAACCTCATTTGTGCCTTTTTGCAATCAGGGATACTTTCTTTGGAGAGGAAATAACGTTTGACTATGGCGCATGTGATTGGCCTTGGAGAAAGcTTTCATTGAAGGATGCCCATATGACTGCAGAAGAGAACTGCTTCgacaactctctgatgagcttTTATTGAAGTATGACCAAATGACGAgaagaagagaactgctctgctccagtaggagacccACAACCCTCTGATGAGcttatattgaaagttgaccatatgacagaggaagagaactgctctgctccagtacgtgacccacaaatctctgatgagagaaagTTACAGTGGATCTTGATTTTGGAGGAGGTGAAGTCCAATCTAAaagAGTCCCCTCAAGTATCATCACCATGGTACAGTGTCTGTGAAGATAGTGAAGCAGACCCAGCATTCACAAAAAAGAGAGGTCCCATAAAGAGAAGATCCTggagcaaacaggaagtacatGCTGTGGTGAAAGCTGAACCATTGGCTCTAAAAACCAGAGATTGGTCAGCTttggatttttatattaaaaactgaatctcgGCTCTGAATAACACTTTCATAGTAACTGCACACTATACATCATTAGTTTAGCACTAACTCTACAGTAATAGACTTtaggaagcagtttataaatacagcttcaaacgctgtattcttgacttgactaaattgtattttcatgctttgt

Function

GO:

id name namespace
GO:0044424 obsolete intracellular part cellular_component
GO:0005622 intracellular anatomical structure cellular_component

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094086

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044064 True 1108 lncRNA 0.43 9 21683776 21692423

Neighbor

gene id symbol gene type direction distance location
XLOC_022324 NA coding downstream 33901 21646702 ~ 21649875 (-)
XLOC_022323 rcc2 coding downstream 148736 21520769 ~ 21535040 (-)
XLOC_022322 rnf207b coding downstream 168594 21499585 ~ 21515182 (-)
XLOC_022321 her4.2 coding downstream 212754 21469203 ~ 21471022 (-)
XLOC_022320 her4.4 coding downstream 219988 21462021 ~ 21463788 (-)
XLOC_022327 vps13d coding upstream 4137 21696560 ~ 21763598 (-)
XLOC_022328 lrrc38a coding upstream 83013 21775436 ~ 21797517 (-)
XLOC_022329 ephb2a coding upstream 110987 21803410 ~ 21946659 (-)
XLOC_022330 si:dkey-68l7.2 coding upstream 262633 21955056 ~ 21957383 (-)
XLOC_022331 phc2a coding upstream 371061 22063484 ~ 22130778 (-)
XLOC_022316 NA non-coding downstream 675822 21004206 ~ 21007954 (-)
XLOC_022315 NA non-coding downstream 745198 20858313 ~ 20938578 (-)
XLOC_022314 NA non-coding downstream 847172 20829345 ~ 20836604 (-)
XLOC_022312 NA non-coding downstream 1164925 20517609 ~ 20518851 (-)
XLOC_022332 NA non-coding upstream 447354 22139777 ~ 22151790 (-)
XLOC_022333 NA non-coding upstream 519702 22212125 ~ 22216128 (-)
XLOC_022335 NA non-coding upstream 866139 22558562 ~ 22598002 (-)
XLOC_022338 AL954857.1 non-coding upstream 1171034 22863457 ~ 22863571 (-)
XLOC_022339 NA non-coding upstream 1319865 23012288 ~ 23023995 (-)

Expression


Co-expression Network