LOC118964574


Basic Information

Item Value
gene id LOC118964574
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21760374 ~ 21766141 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051681.1
GACGACCTGAAACCGCGGCGCTTTGCCATTTAAACTATATATTTTGCAGCGGTTGTAGGGTTTAAATGTCGACCCTCAGATATTACAAGACACATCCAACTATCTAACAACGTAGGCTGGTGCAGTTTGAGTATCAGAGaatgcagagagggaggaggcagaggagttggaagtGCAGACAGAACGTTACATCCAAGACCTCCAGCAGGCCCTGAGTGGGACTGGAACCTCCTCTACTGACTACAGCTTCACCTTGACCTCTAACCCCGGCCTATTCCATGGGTTATGTGGCAAGTCATAACATAGGCTGTGTTTTCTGCCCCAACAAGTTAAGCCATTTAACGACTTTCCTGAACTATAACCCTTCCCAAAACTTAACCCTTGGACATGATCCTTAAAAATGCTAATATCGGAAACCATGACTTGAATTCAATTTGTGTCACAAATGCTAAAATattagcatttggaaacagtgGCAGGGAAaataaaaccaaagcatggattgctgtcaaaCCTTGTCCAAAGACTGTTTATaagGACCCTCTAACAAGCACTTATTGAGCTCTAACTAGCACCCAGGAAGGCATTGAACCCAGGAAGGCATTGAACCCAGGAAGGCATTGAACCCAGGAAGGCATTGAACCCAGGAAGGCATTCATGTGGTGAAGTAACTCTAGGCTCTAGGAGGTTGCCATGCGTTAAGAGTGTCATATACCTGAAGGCCAGTGGTGTGATGCAATACCGCTATGTTATTATCACAACCTTGGGAAATTCGGCTTGCAGCTTCACATTATATTAAAACACACAAGTCAGTCAGGCAATCATACCAACAGCGGGGTTGTATTGGTACTACAGTTGATGGATCATTCAGGAGTGTTTGTTGTTGCTTTCGAGTGCTAATATAAGGCTCTGTGATGTCATCCTATGATATTCATGTCTTCCTCCCACTCTGTGCTTTGACAGGAAAATGATCCTCATCACGTTGTAAAGTAGAATACAGCACTATCACTAtggaggtaaacacacacacacagccaactaACAGCTTAGTGACGGTCAGTGTGCTCAGAGGTCGaccacatgcgcacacacacacacatctgctttGAGCTGTGTTGCCATAGTAATAATGTAATGATAGAATGGAAATCCTAGTGCATGTGTTTCAGTAGAAAATGGAAATGAATAGAATTGACTGTTTCAGAAACGAGAGTTTTGGACAAGGCCATTCACAGAACACACTGTGGTGTATCATCCCTGAGGAAAAAGCGCCTAACATTTTTCTGTTGCTCAACAGTTAATAATAAATATGAATTAATTCATCATAGAGATATGACTCATTACTATTAAAGGGTCCATGTCTAatgtggggtggcagggtagcctagtggttagagcgttggactagtaaccggaaggttgcaagttcaaatccccgagctggccTGGACTGGAGAGTTAGAAACATCTGGGTGGTTGTTGGGTAGGCCTTGATGTAAAGATTGGAATGTGATCTTCATGTTTTTACTGCACATGACTGTCCCAGAGCATCAGCCCCAGGACGGCTCCCACATAGCTGTGAGTGGATTATCACTATTATCGTGCCAGCAGTGATCAGTTTATCATCATAACAGCAACATGCGTTTGACTATAaacgccctgtagcactcacttccgtcatcatgaagtgctttgagagactagtcaaggatcatatcacctccatcctacctgacacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051681.1 True 1740 mRNA 0.44 3 21760374 21766141

Neighbor

gene id symbol gene type direction distance location
LOC110523418 LOC106568264 coding downstream 25968 21703680 ~ 21734406 (-)
LOC110523410 LOC106568355 coding downstream 222647 21535928 ~ 21537727 (-)
LOC110523405 LOC106568369 coding downstream 296182 21460821 ~ 21464192 (-)
grk3 LOC106568375 coding downstream 318494 21361805 ~ 21441880 (-)
LOC118964573 NA coding downstream 385317 21372625 ~ 21375057 (-)
LOC110523425 NA coding upstream 191651 21957792 ~ 21959442 (-)
LOC110523426 LOC106567959 coding upstream 237196 22003337 ~ 22021560 (-)
LOC110523428 LOC105015193 coding upstream 267682 22033823 ~ 22037948 (-)
march5 march5 coding upstream 276640 22042781 ~ 22045492 (-)
LOC110523430 LOC106567981 coding upstream 301760 22067901 ~ 22087866 (-)
G378324 NA non-coding downstream 24178 21735675 ~ 21736196 (-)
G378322 NA non-coding downstream 29248 21730133 ~ 21731126 (-)
G378304 LOC106568324 non-coding downstream 74984 21682396 ~ 21685390 (-)
G378297 NA non-coding downstream 90324 21668859 ~ 21670050 (-)
G378275 NA non-coding downstream 130624 21629513 ~ 21629750 (-)
G378364 NA non-coding upstream 30284 21796425 ~ 21796737 (-)
G378380 NA non-coding upstream 62433 21828574 ~ 21828929 (-)
G378381 NA non-coding upstream 63325 21829466 ~ 21829679 (-)
G378383 NA non-coding upstream 68246 21834387 ~ 21834765 (-)
G378385 NA non-coding upstream 71233 21837374 ~ 21837594 (-)
G377991 NA other downstream 730591 21029458 ~ 21029783 (-)
G377809 LOC106568602 other downstream 1055234 20704613 ~ 20705140 (-)
G377800 NA other downstream 1065666 20694096 ~ 20694708 (-)
G374786 NA other downstream 3201207 18558140 ~ 18559167 (-)
G374189 NA other downstream 3757204 18002820 ~ 18003170 (-)
G378359 NA other upstream 25521 21791662 ~ 21791993 (-)
LOC110523434 LOC106567989 other upstream 411124 22177265 ~ 22179322 (-)
jmy LOC106568093 other upstream 1033559 22799696 ~ 22859199 (-)
LOC110522831 LOC106563032 other upstream 1781059 23488916 ~ 23556681 (-)
G380610 LOC106567829 other upstream 1943657 23709798 ~ 23711891 (-)

Expression


Co-expression Network