zo6 (zo6)


Basic Information

Item Value
gene id zo6
gene name zo6
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28672979 ~ 28677678 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001165175.2
ACATCACTGATGTGTAATAAGAACCTTACATATTTTTTTGAGATTCATGAAACTTTTATTAATAACTGTTAGCTTGCAGCAATGTTGATTAACGAGGCTTTTCAGAGACAATTATCTACCATTGTCGAGGTATTAGTTGCAGCGGCAGTTGCGGAGATGGGCAGACTCCTCGATGAGTGCTCTGCTTTTGTTATGCCTCTAAAGTTGGTCCAGCAGAATGAGGAAAGTATTTTGCTGAAGAGTAGGCTTCAACGTGTGAACAAAACCAAGACGagacaattttcatcattCATGAAGATGTTGGGTAAAACATCATTGGAAAAAATGGCCATGTTAATGAAGGTAATCATGGTCGAAAGGGAGAGGACTGCCAAGGGCATGAGCGCCCAGAGGCGTGTCAGTCGGGcaagggggacagaggaaggagcaCCAAgagGAGACAGTCTTCATTTCCACAACTACTGCACTGACACTGTCTCTGAGAGTGCTCACCAAGAGGAGGATGACTTTAACCCCCAGACCTCACCTGCCTCAGAGACGCAAGACAACCAGAGAAACATGGAGCCAAACTCAGGCAGGAATGGAGAAGATGCCCAGTGTGGAGGGGAACCTACTGGAGATGTGGTATTGCTCTCTGAATTTGATCATCAAGAGGAAGTTCACCTTAATCCCCAGCTCTCACCTTCATCAGACCCAGAGAAACAACATGGCAAACCCTCAAACATGGAGCCAAACCCAGGCAGGATTGGAGAAGCTGTCCAGAATGGTGATGTCCAGAATGGTGATTCTTCAAATACAGACCAAAATCCAGATGCAAGTGATGCCACCGGAGCAGTGAAGAGGCCATTCATTTGTGACGTTTGTGGAAAGTGTTTCGATTGGAGATGCACGCTTAAAGCCCACCGTAATCATCACACCAAACCCTTTAGCTGCCCACAGTGTGGGAAATGTTTTGGTACGAAGACTGGGTGTAATAATCACCTCTTGGCGGTACATTCTAAAGACAAGTCCTTCAAATGCACAGATTGTGGGAAGAAGTTTGCTTTGAGAAAAGGTTTCGTCAAACACAGGGATTTCAACCCAACTCTGCATACCTGCACAACATGTGAAAAATCGTTCTGTGGGGAACGTGCGCTAAAACGGCACAACTTCAGTGATCACCCGGAAAAGGCATACATCTGCTCTTTGTGTCCAAAAACCTTTCGGTCATGGCCGATATGGAAACGTCATAAGGCAGAGCACTCGGGAGAAGAAGTATTGCTGTGAAACCTGTGGCAAGCTTTTCTGTTCATCTTCATCCTTAGCCAGTCATCAGAGAACAACTCATAGAGCAAAGGCTTATAGCTGTGATGTATGTACTAAAGGTTTCAGGGATGTAACCAATTTCCAAAAACATATGACCTCCCACATTAGAAAAGGCCATGTTAGTCTAGAAAAAGCTTTTGCCTGTAGTGTATGTGACAAATGTTTCTCATGTGCACGCACTTGGCGATCATCTGACCATCCATATCGGAGTAAAATGTTTTGGTTGTAGC

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001165175.2 True 1535 mRNA 0.45 4 28672979 28677678

Neighbor

gene id symbol gene type direction distance location
LOC110523552 habp4 coding downstream 7255 28659697 ~ 28665724 (-)
LOC110523550 LOC106566624 coding downstream 78011 28536287 ~ 28594968 (-)
gadd45gb.1 LOC106566617 coding downstream 194615 28476730 ~ 28478364 (-)
c7b c7-1 coding downstream 237622 28431046 ~ 28435357 (-)
LOC110523544 LOC106567207 coding downstream 266829 28404505 ~ 28406150 (-)
apba1b LOC106566682 coding upstream 102784 28780462 ~ 28792050 (-)
LOC110523560 mch1 coding upstream 237745 28915423 ~ 28916044 (-)
LOC110523562 LOC106566722 coding upstream 257891 28935569 ~ 28993616 (-)
anapc2 LOC106566731 coding upstream 316421 28994099 ~ 29004755 (-)
tprn LOC106566736 coding upstream 334341 29012019 ~ 29041380 (-)
G386338 NA non-coding downstream 2980 28669621 ~ 28669999 (-)
G386335 NA non-coding downstream 4204 28667315 ~ 28668775 (-)
G386332 NA non-coding downstream 16464 28656293 ~ 28656515 (-)
G386228 NA non-coding downstream 170857 28501856 ~ 28502122 (-)
G386225 NA non-coding downstream 176248 28496525 ~ 28496731 (-)
G386374 NA non-coding upstream 55916 28733594 ~ 28733843 (-)
G386389 NA non-coding upstream 78693 28756371 ~ 28770569 (-)
G386403 NA non-coding upstream 95940 28773618 ~ 28778136 (-)
G386729 ssna1 non-coding upstream 328899 29006577 ~ 29009082 (-)
G386725 NA non-coding upstream 331560 29009238 ~ 29045158 (-)
G386222 NA other downstream 181607 28490966 ~ 28491372 (-)
G386126 NA other downstream 318234 28351775 ~ 28354745 (-)
G385769 NA other downstream 458160 28214543 ~ 28214819 (-)
G385617 NA other downstream 662902 28009267 ~ 28010077 (-)
G383422 NA other downstream 2674199 25996806 ~ 25998780 (-)
G387064 NA other upstream 715417 29393095 ~ 29394816 (-)
G387052 LOC106566935 other upstream 756927 29434605 ~ 29435311 (-)
G387321 LOC100136012 other upstream 925505 29603183 ~ 29644748 (-)

Expression


Co-expression Network