G386403


Basic Information

Item Value
gene id G386403
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28773618 ~ 28778136 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU438852
CTGTCAGTACGGGCTCTGAGGAGCGGCTGATTGCCGACACCGGCTGATGGGGCTCGTCCATTGGCTCGTCCAGCTCGTTGTCGGTGTAAGCCCCGCCCTCATCGGCCGTGTCGTCGTAGTCACTGGTCAGCCGGCTGTCCATGCTCAGGTAGTCAGCGCTCATCGCTGACAGGTATGACATGCGGTCGTCATGGATATCCAGGTCCTCCTCCGAGCCGTCCAaCTTGCCCTCACAGACCCACACGGCCCGCTCCTGCTGTGCCCGGATAGAGTCCTTCACACTCCCGTACCACCCATCATTGGCTGAGTTCAGGTCAACGGTCGCTGTGCATGGAAACAAAGCAGAAAGATTGGCGCAATAGCCACCCTGGCTTTCCAACACTGCCACcctggctatccaacactgccaccctggctatccaacactgccACCGGGGACCGCCAGTGTAACtgcaattagaggtcgaccgattatgatttttcaacgccgataccgattattggaggaccaaaaaaagcagatttttaaaattaatttgtaataatgacaattacaacaatactgaatgaacactta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU438852 True 577 lncRNA 0.54 2 28773618 28778136

Neighbor

gene id symbol gene type direction distance location
zo6 zo6 coding downstream 95940 28672979 ~ 28677678 (-)
LOC110523552 habp4 coding downstream 107894 28659697 ~ 28665724 (-)
LOC110523550 LOC106566624 coding downstream 178650 28536287 ~ 28594968 (-)
gadd45gb.1 LOC106566617 coding downstream 295254 28476730 ~ 28478364 (-)
c7b c7-1 coding downstream 338261 28431046 ~ 28435357 (-)
apba1b LOC106566682 coding upstream 2326 28780462 ~ 28792050 (-)
LOC110523560 mch1 coding upstream 137287 28915423 ~ 28916044 (-)
LOC110523562 LOC106566722 coding upstream 157433 28935569 ~ 28993616 (-)
anapc2 LOC106566731 coding upstream 215963 28994099 ~ 29004755 (-)
tprn LOC106566736 coding upstream 233883 29012019 ~ 29041380 (-)
G386389 NA non-coding downstream 3049 28756371 ~ 28770569 (-)
G386374 NA non-coding downstream 39775 28733594 ~ 28733843 (-)
G386338 NA non-coding downstream 103619 28669621 ~ 28669999 (-)
G386335 NA non-coding downstream 104843 28667315 ~ 28668775 (-)
G386332 NA non-coding downstream 117103 28656293 ~ 28656515 (-)
G386729 ssna1 non-coding upstream 228441 29006577 ~ 29009082 (-)
G386725 NA non-coding upstream 231102 29009238 ~ 29045158 (-)
traf2b traf2 non-coding upstream 292437 29070573 ~ 29149445 (-)
G386777 NA non-coding upstream 356584 29134720 ~ 29135479 (-)
G386797 NA non-coding upstream 391540 29169676 ~ 29169913 (-)
G386222 NA other downstream 282246 28490966 ~ 28491372 (-)
G386126 NA other downstream 418873 28351775 ~ 28354745 (-)
G385769 NA other downstream 558799 28214543 ~ 28214819 (-)
G385617 NA other downstream 763541 28009267 ~ 28010077 (-)
G383422 NA other downstream 2774838 25996806 ~ 25998780 (-)
G387064 NA other upstream 614959 29393095 ~ 29394816 (-)
G387052 LOC106566935 other upstream 656469 29434605 ~ 29435311 (-)
G387321 LOC100136012 other upstream 825047 29603183 ~ 29644748 (-)

Expression


Co-expression Network