XLOC_022874 (BX005392.4)


Basic Information

Item Value
gene id XLOC_022874
gene name BX005392.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 17318521 ~ 17319849 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045479
AGGTCTTGAAGAACCAGCAGTTTTGTGATGGAACAATTCAAAGTCTTGGTGCCTGGTGTCGTTATCTGGGCTGGACCCTCTGCGTGTCCCTCTGTCTTACATGTGTTACCATCACGGGTAGTCTCGGACTAAAGTGGGTGATATTTGTTAGTAAGATGCTTTGTTGAGACTTGAATATTGTGTCTTTGTGCACAATATTTGTTTCCCAAAcatatgcaaattaattaaaattttatacaCTCCAGGTTTAACAAAACAGAGACTCAACTGTGGGCTCATTCTGTCTTCTTTTCTCTCATCTGCggtggttttgttttgcatccaGCGATGATTCTTATAACTGCAATCACAGTTTCTCTAAAACATCGAAAAAGATCTGACTGGTTCCACAGTCTGAGTGTAACAGAGCCTGTCTTTGAGTTATTGAGACACAGAGGCCAAAAATCTGATGTCTTTGGTAGTAAATGCCAGCAGTTCACAGAGAGAAGCACACATTTTGAAATGGTGCTTGCTGACCGTCAGAGAGCCAGATTTTTGCGCTTAGTGCGTCCACCAAATTCAAAAGATTTGAAGCTTGTGAGAGGCCAGATCAAGAAACAAACACTCTTATATAAAACTACAAGGTATTACTTTTTGATCAGATTTACTCTCAAAGTCTGTGTAAACCAgatgtttcttttatttcagtatgttattGTACacccaactgaaacagaatactgAGTGGGAGGCAAGGCTTTCTTTTGCACATATTTCAGTGGATAAACTTTTGTTTTCACACAGACATTAAAGTGGCCAtatttttctgtttctgtttttgttttggagGTCTCCTACAATATATGCATCCACCAAAGTGCAAAATAAGGTCAAAAAGTGATAGTAAACAAAAGTAAAGCTGTTTATAGGTTGAATATGTTATTATCAAACTGCCTACTGACCTTTATCATGATGTATTGTTGAAGTGCATTAGCCAGCATGGATTAAACATTGTAGTCTATAATCAAAaggcaaaaaatgtaaaaagcaaatcTGCTAATTTTCTCATAATGTTCATAGTCTTGGTCTTAGTAAAAACAGCATTCGGTGTAGTTCTGCAAAAATTAATATTGCTGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117494

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045479 True 1116 lncRNA 0.37 3 17318521 17319849

Neighbor

gene id symbol gene type direction distance location
XLOC_022873 NA coding upstream 35986 17280840 ~ 17282535 (+)
XLOC_022872 spag6 coding upstream 38617 17269849 ~ 17279904 (+)
XLOC_022871 bmi1a coding upstream 51286 17260001 ~ 17267235 (+)
XLOC_022870 commd3 coding upstream 58878 17256793 ~ 17259643 (+)
XLOC_022869 mllt10 coding upstream 102209 17140938 ~ 17216312 (+)
XLOC_022875 NA coding downstream 2637 17322486 ~ 17325645 (+)
XLOC_022876 NA coding downstream 12317 17332166 ~ 17334612 (+)
XLOC_022877 pdia4 coding downstream 14829 17334678 ~ 17341458 (+)
XLOC_022878 ezh2 coding downstream 25672 17345521 ~ 17364456 (+)
XLOC_022879 CU041377.1 coding downstream 418670 17738519 ~ 17738635 (+)
XLOC_022863 NA non-coding upstream 416660 16719606 ~ 16901861 (+)
XLOC_022864 BX004771.1 non-coding upstream 510873 16807521 ~ 16807648 (+)
XLOC_022861 BX005275.1 non-coding upstream 1109521 16207562 ~ 16209000 (+)
XLOC_022859 NA non-coding upstream 1123791 16166765 ~ 16194730 (+)
XLOC_022880 BX255952.1 non-coding downstream 757694 18077543 ~ 18077659 (+)
XLOC_022882 BX927064.1 non-coding downstream 1049853 18369702 ~ 18369817 (+)

Expression


Co-expression Network