XLOC_022873


Basic Information

Item Value
gene id XLOC_022873
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 17280840 ~ 17282535 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046803
AAGGAATCTCGGAATACGGTAGGCCATGTAGGGAAATGGGGCCTTGTGAGGTATTTTGAGGAATTTGGTAGACATGAAGATTTATTTATCAATTGACATTTTTAGCTCTTCAAGAGAACATTGGATTCAACAACTACAGTTCATTAGAATCATCCCAATGTCAAGAAACTGATCCTCCATTGTGCATCAAGTTGTGTTTCAGCGACGGATGCTTCTCCTCTGAGTTTGTCTTTACTGGGAATGAGATGGGCAGGTTGGCATTGCAAAGCAGCAGAGGGCCTTCTGTTCATAATGCCACTGTAGCTGCTTTGATTGACAGGGTGCAAATTGGAAAGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046803 True 336 lncRNA 0.43 2 17280840 17282535

Neighbor

gene id symbol gene type direction distance location
XLOC_022872 spag6 coding upstream 936 17269849 ~ 17279904 (+)
XLOC_022871 bmi1a coding upstream 13605 17260001 ~ 17267235 (+)
XLOC_022870 commd3 coding upstream 21197 17256793 ~ 17259643 (+)
XLOC_022869 mllt10 coding upstream 64528 17140938 ~ 17216312 (+)
XLOC_022868 pip4k2aa coding upstream 153007 17068724 ~ 17127833 (+)
XLOC_022874 BX005392.4 coding downstream 35986 17318521 ~ 17319849 (+)
XLOC_022875 NA coding downstream 39951 17322486 ~ 17325645 (+)
XLOC_022876 NA coding downstream 49631 17332166 ~ 17334612 (+)
XLOC_022877 pdia4 coding downstream 52143 17334678 ~ 17341458 (+)
XLOC_022878 ezh2 coding downstream 62986 17345521 ~ 17364456 (+)
XLOC_022863 NA non-coding upstream 378979 16719606 ~ 16901861 (+)
XLOC_022864 BX004771.1 non-coding upstream 473192 16807521 ~ 16807648 (+)
XLOC_022861 BX005275.1 non-coding upstream 1071840 16207562 ~ 16209000 (+)
XLOC_022859 NA non-coding upstream 1086110 16166765 ~ 16194730 (+)
XLOC_022860 BX005275.2 non-coding upstream 1103540 16174199 ~ 16177300 (+)
XLOC_022879 CU041377.1 non-coding downstream 455984 17738519 ~ 17738635 (+)
XLOC_022880 BX255952.1 non-coding downstream 795008 18077543 ~ 18077659 (+)

Expression


Co-expression Network