G371612


Basic Information

Item Value
gene id G371612
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15714329 ~ 15714595 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU422343
attagcctatcagaagcttctaaacccatgacatcattttctggaatttaaaggcagtcaatttagtgtatgtaaacttctgacccactggaattgtgataccgtgaattacagtggggcaaaaaagtatttagtcagccaccaattgcgcaagttctcccacttaaaaagatgagaggcctgtaattttcatcataggtacacttcaactatgacagacaaaatgagaaaaaaaatccagaaaatcacattgtaggattatttatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU422343 True 267 lncRNA 0.36 1 15714329 15714595

Neighbor

gene id symbol gene type direction distance location
LOC110523300 LOC105028392 coding upstream 122886 15464555 ~ 15591443 (+)
uck1 LOC106569943 coding upstream 568809 15117198 ~ 15187954 (+)
LOC110519478 LOC106596183 coding upstream 617572 15086878 ~ 15096757 (+)
LOC110518158 LOC106596183 coding upstream 638771 15065627 ~ 15075700 (+)
LOC110519479 LOC106596183 coding upstream 659976 15047739 ~ 15054353 (+)
st6galnac4 st6galnac4 coding downstream 35596 15750191 ~ 15756190 (+)
st6galnac6 sia7f coding downstream 41664 15756259 ~ 15772026 (+)
LOC110523312 surf1 coding downstream 74200 15788795 ~ 15791028 (+)
med22 med22 coding downstream 81582 15796177 ~ 15810502 (+)
usp20 LOC106569850 coding downstream 102205 15816800 ~ 15839459 (+)
G371610 NA non-coding upstream 1128 15712970 ~ 15713201 (+)
G371598 NA non-coding upstream 15638 15690051 ~ 15698691 (+)
G371597 NA non-coding upstream 25882 15688226 ~ 15688447 (+)
G371567 LOC106569805 non-coding upstream 62893 15650978 ~ 15651436 (+)
G371544 NA non-coding upstream 99194 15614205 ~ 15615135 (+)
G371615 LOC100194725 non-coding downstream 76964 15791559 ~ 15795122 (+)
G371632 NA non-coding downstream 100610 15815205 ~ 15815749 (+)
G371639 NA non-coding downstream 136775 15851370 ~ 15851721 (+)
G371653 NA non-coding downstream 155178 15869773 ~ 15870026 (+)
G371656 NA non-coding downstream 172643 15887238 ~ 15916078 (+)
G371182 NA other upstream 585512 15124290 ~ 15128817 (+)
LOC118964542 LOC106569496 other upstream 908858 14798616 ~ 14805526 (+)
G370414 NA other upstream 1346168 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 1388434 14321104 ~ 14325895 (+)
G372281 LOC106569177 other downstream 505011 16218328 ~ 16220933 (+)
G372373 NA other downstream 1021047 16735642 ~ 16738500 (+)
G372618 LOC105030512 other downstream 1155839 16870434 ~ 16882185 (+)
G373726 NA other downstream 1989518 17704113 ~ 17707757 (+)

Expression


Co-expression Network