G375554


Basic Information

Item Value
gene id G375554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19377225 ~ 19377666 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU426991
tgcagatgtttttcagcgcaggtactgggagactagtgaggattgagggaaagataaacggggcaaagtacagagagatcatgaaaacctgctccagagcgcttaggacctcagattggggcgaagattcacctttcaataggacaatgaccctaagaacaCAACGCAAGAGTGCctttgggacaaatctctgaatgtccttgagtggccctaccagagcctggacctgaacccgatcgaacatctctggagagacctgataataTATGTGCtgcgacgttccccatccaacctgacagattttgagaggatatgcagagaagaatgggagtaactccgccaaatacaggtgtgccaagcttgtagcgtcatacccaagaagacttgaggctataatcgctgttaacaaagtactgattaaagggtctgaatacttctgtga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU426991 True 442 lncRNA 0.47 1 19377225 19377666

Neighbor

gene id symbol gene type direction distance location
LOC110523379 LOC106568729 coding downstream 1990 19363387 ~ 19375235 (-)
LOC110523375 LOC106568736 coding downstream 42201 19214846 ~ 19335024 (-)
LOC118964778 NA coding downstream 172559 19204538 ~ 19204666 (-)
LOC110522815 LOC106568813 coding downstream 278755 18962511 ~ 19098470 (-)
LOC110523374 LOC106568818 coding downstream 497037 18853417 ~ 18880188 (-)
LOC110523380 LOC106568716 coding upstream 18519 19396185 ~ 19428814 (-)
LOC110523384 LOC106568686 coding upstream 130057 19507723 ~ 19559754 (-)
LOC110523382 prkaa1 coding upstream 184213 19561879 ~ 19580316 (-)
LOC110523387 LOC106562971 coding upstream 212478 19590144 ~ 19618069 (-)
LOC110523381 LOC106568667 coding upstream 243359 19621025 ~ 19825534 (-)
G375597 NA non-coding downstream 5145 19370572 ~ 19372080 (-)
G375589 NA non-coding downstream 21512 19355454 ~ 19355713 (-)
G375588 NA non-coding downstream 21889 19355128 ~ 19355336 (-)
G375584 NA non-coding downstream 27081 19349842 ~ 19350144 (-)
G375583 NA non-coding downstream 27405 19349570 ~ 19349820 (-)
G375601 NA non-coding upstream 4496 19382162 ~ 19382452 (-)
G375678 NA non-coding upstream 85095 19462761 ~ 19463023 (-)
G375683 NA non-coding upstream 88643 19466309 ~ 19466586 (-)
G375711 NA non-coding upstream 107483 19485149 ~ 19485374 (-)
G375720 NA non-coding upstream 111855 19489521 ~ 19489722 (-)
G374786 NA other downstream 818058 18558140 ~ 18559167 (-)
G374189 NA other downstream 1374055 18002820 ~ 18003170 (-)
LOC110523354 LOC106569496 other downstream 1855738 17483696 ~ 17521507 (-)
G373228 LOC106569424 other downstream 2251418 17124037 ~ 17125807 (-)
LOC110523341 LOC106569324 other downstream 2435034 16909582 ~ 16942359 (-)
G377800 NA other upstream 1316430 20694096 ~ 20694708 (-)
G377809 LOC106568602 other upstream 1326947 20704613 ~ 20705140 (-)
G377991 NA other upstream 1651792 21029458 ~ 21029783 (-)
G378359 NA other upstream 2413996 21791662 ~ 21791993 (-)
LOC110523434 LOC106567989 other upstream 2799599 22177265 ~ 22179322 (-)

Expression


Co-expression Network