XLOC_023313 (si:ch211-146l10.7)


Basic Information

Item Value
gene id XLOC_023313
gene name si:ch211-146l10.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 9995077 ~ 9997948 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046117
CTGACTGGTAGCGCACAAACTATAAGAAGGCCAGTTTAAGACTAATACTGCATGGTTTGGTGaaatttttctttgtattttgcAGCTGATGTGCTGAGGGTAGTGGATGGTTGTTTTGGCTTTGGTTGCTATGCGTGCTACAACAATGTGGATTTTAAGTTATTCCTTAGCAGTACTTTTAGCCCTTGGTGCATGTGATGACGATGATGGTATTGCAACTGTCTATGCCTACAGCCCTGGTAGCAGTGGAGTCAATCCTGTATCTAATGATCCTGGTCAGTCCAAGCAGGAAGTGAAACCAAGTCTCTCTAATTTTTATGGCTTGACTGATGTATCTGGACCAGTCAGCAAGGATACAGTTAAATGGGGCTTTGACACTACCTATAACTCTCAGGCTGGCTCTTCAGGCACTCCCATGATAAGTGAAAAACCAGGCTCCGAATCGCATACAAGCCAACAAGGATTTCAAGTTGATTCGGTTGGAAGTGGTAGTCTTGTTCCTGGCTCTGTGGGAAATGCAGTGAGTATGGGCATGTCTGGATATGATACAAGTCAGTCAACCACTGTCCAAGGCGCTGAAGTCATCAGTTCTTCTGTCCTGAGCCCATTGCAGCAAAGCAGTTCTGTTTCTAAGCCAGTGCAGGTAGTTTCCTCAAATCCACTTCAAATTAGCAGTACATCTGTGGTTAAGCCCAGCAGCCAACAATTAGTGCAGACCATTTTCCAGTCCAGCAATGAGCAACCGGCGAGTTCTGGAACCATGGCCCAGTCTAACACTTTGCAGTTATCCCTGCCCAGTGGCCAACAAATATCTCAGACTAGCTTCCAGTCTGCAGTGCCATCGGGTAAAAGGCCCCGTAAGCCTCTGAAAGGCAAACCCCACCATCAAACTGGTTCCAGGCCAGGTCACAATGTGCCCATCAGCTCGAAACCTTCCAAAGCCTCACAACCTAGCTTATCGATACTACAGTATGGTAGTGTGCCAAGTAGCCAAGCAATGGCTGGCTATGAACTTGTGAGCCAGTCAGGCAGCCAGCAATCAGCCCAGTCCAGTGGCCAAACTGTGAATCAACCAGGAATCATACAAACTCCCAGTGTCATTGACATCTCTGTGGTCCAGCCCAGTAGCCAGCTGATTCAACAGGCAGTTGATGCCTCTGTGGCCCAGGTCTCCAGCCAGCAGCTTTTACAGGGCAGTCAATCTGTTTCCCAGTCAAATAATGTAGATGTGGTTGATGGAAGTTATGTTTTTGTGGCACAGCCCAATGGAGTGACTCCTCTCAAGCATCACaaaggtaaacctcactctggGTCAAAGCCTTCCAGTAATAGTCCTCTTCAGGCACTTACATTTACTTCTGTAGATCAGTCCAGTAGCCAAATACCAGTACAAACCATCTACCAATCTGGGCCCCAAGCAGTTCTTCAACTGCCAGTACAAGCCAACTACCAATCTTCACCTCCATCCAAATGGCAGACACTGGTACAGGGTAGTTACCAGTCAGAGGCTCAGCCTACTTCCCAGCAGCAAGGACAAGCCAATTACCAGTTTGGGCCCTGGTCTGTTGTTCAACAACCAGCACGAATGGTCTACCAGTCTGCTAGCCAGCCCACTGTGCCACACCTAGTAGAAGCCATCTACCAGTCTGCTTCCCAACAACCAGCACAAGCTAGCTACCAGTTGGTGGAACGGCTAGGTGTCCAACAGCCAGCACAGGTCGGCTCATCTTTAGGCCATCTGCAACCAGGACCATTTAACTATGAGTATGTTGTCAACCAGAATGGGCAAACCCTTTTCAAGCCAGTGCAGTCCCATAAGATTCATCAGACTGGCTCCAAACTGTATTCATGCCAAGAGCTACCAAAGCACGGTTACAAGCGGAGACATCACTCTCCATCTTCACACAGTATTCCAAACCTTGCTCAGGTTATCAAGCCTGTTATTTTGCCTAGTGACCCGATTCCTGTGGATGTCAACTTCCCTAGCCCCCTCACATCTACTTTCAGACCAGCAGATCTGCCTAGACATCCTAGCTTGCAGTCTGTAGTGCTTCAAAGTGAACAGCCAGGTGTGCTTGAGGTCCAACCCAGTGGTTTGTCTCTTGCCAAGCCTGGACCAGTGAGTTATACTTTAGTATCTCTGCCCACTGGTCATCCTTCAAGGCCATTGCAGCTGCCTAACTCCCAGCCTCCAACCAAGCTATGGCAATATCTGTTTTTGCCCATAGTAAAGCCAAACAAACTGGAGTATTCCATCTTTGAGGCGCAAGTTCTCCCTAGCCATGTGTCTTCTGTTCCTGTACAGTTTGTTTCCCAGCCTCAAATGCTCCCCGCTAGTCTGTCTATCACTCAATCCAGCTCTTCCCCGGCTGTGCCAGTGCAGTCCAGCAATCAACCTCAAGTAGTGTCAAGTTCTGAGACTGTATTCCAGCCTGTATTGCAGACCTCTTCAGCGGTGGTGCCATCAATTTCCCAAACCTGGAGTATCCCAGTAGTGTCAAACTTTGAGTCTGTGTTACAGTCAGTGAAACCTGAACTTCCAATTCCAGTCCAGTTGAATTATCAGACTGTCACAGATCAAAATGCTCCTGGACCTGCTGGAAGCAATAGGCATTCATCATGGAAGTTGCTTAAGCTGTTGCAACAAGTGAAGTCCTaggtgtttgtttgctgtttcCTGATGTATGCTTGCTTTGTTGTTAATAAATTATTGT
>TCONS_00046846
TCAAAGCCTTCCAGTAATAGTCCTCTTCAGGCACTTACATTTACTTCTGTAGATCAGTCCAGTAGCCAAATACCAGTACAAACCATCTACCAATCTGGGCCCCAAGCAGTTCTTCAACTGCCAGTACAAGCCAACTACCAATCTTCACCTCCATCCAAATGGCAGACACTGGTACAGGGTAGTTACCAGTCAGAGGCTCAGCCTACTTCCCAGCAGCAAGGACAAGCCAATTACCAGTTTGGGCCCTGGTCTGTTGTTCAACAACCAGCACGAATGGTCTACCAGTCTGCTAGCCAGCCCACTGTGCCACACCTAGTAGAAGCCATCTACCAGTCTGCTTCCCAACAACCAGCACAAGCTAGCTACCAGTTGGTGGAACGGCCAGCACAGGTCGGCTCATCTTTAGGCCATCTGCAACCAGGACCATTTAACTATGAGTATGTTGTCAACCAGAATGGGCAAACCCTTTTCAAGCCAGTGCAGTCCCATAAGATTCATCAGACTGGCTCCAAACTGTATTCATGCCAAGAGCTACCAAAGCACGGTTACAAGCGGAGACATCACTCTCCATCTTCACACAGTATTCCAAACCTTGCTCAGGTTATCAAGCCTGTTATTTTGCCTAGTGACCCGATTCCTGTGGATGTCAACTTCCCTAGCCCCCTCACATCTACTTTCAGACCAGCAGATCTGCCTAGACATCCTAGCTTGCAGTCTGTAGTGCTTCAAAGTGAACAGCCAGGTGTGCTTGAGGTCCAACCCAGTGGTTTGTCTCTTGCCAAGCCTGGACCAGTGAGTTATACTTTAGTATCTCTGCCCACTGGTCATCCTTCAAGGCCATTGCAGCTGCCTAACTCCCAGCCTCCAACCAAGCTATGGCAATATCTGTTTTTGCCCATAGTAAAGCCAAACAAACTGGAGTATTCCATCTTTGAGGCGCAAGTTCTCCCTAGCCATGTGTCTTCTGTTCCTGTACAGTTTGTTTCCCAGCCTCAAATGCTCCCCGCTAGTCTGTCTATCACTCAATCCAGCTCTTCCCCGGCTGTGCCAGTGCAGTCCAGCAATCAACCTCAAGTAGTGTCAAGTTCTGAGACTGTATTCCAGCCTGTATTGCAGACCTCTTCAGCGGTGGTGCCATCAATTTCCCAAACCTGGAGTATCCCAGTAGTGTCAAACTTTGAGTCTGTGTTACAGTCAGTGAAACCTGAACTTCCAATTCCAGTCCAGTTGAATTATCAGACTGTCACAGATCAAAATGCTCCTGGACCTGCTGGAAGCAATAGGCATTCATCATGGAAGTTGCTTAAGCTGTTGCAACAAGTGAAGTCCTag

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-091112-4 No description available

Ensembl:

ensembl_id ENSDARG00000093216

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046117 False 2714 mRNA 0.48 3 9995077 9997948
TCONS_00046846 True 1332 lncRNA 0.48 2 9995132 9996478

Neighbor

gene id symbol gene type direction distance location
XLOC_023312 zgc:171977 coding downstream 3791 9976212 ~ 9991286 (-)
XLOC_023311 vps41 coding downstream 34761 9895851 ~ 9960316 (-)
XLOC_023310 NA coding downstream 120386 9870547 ~ 9874691 (-)
XLOC_023309 BX649325.1 coding downstream 282467 9712495 ~ 9712610 (-)
XLOC_023308 uba5 coding downstream 305147 9673227 ~ 9689930 (-)
XLOC_023314 zgc:171750 coding upstream 5478 10003426 ~ 10006158 (-)
XLOC_023315 zgc:171474 coding upstream 12682 10010630 ~ 10014624 (-)
XLOC_023316 zgc:173856 coding upstream 20705 10018653 ~ 10021341 (-)
XLOC_023317 CR391965.1 coding upstream 257966 10255914 ~ 10256030 (-)
XLOC_023318 NA coding upstream 271908 10269856 ~ 10275658 (-)
XLOC_023665 dre-mir-735 misc upstream 28180013 38177961 ~ 38178027 (-)
XLOC_023307 NA non-coding downstream 382721 9507674 ~ 9612356 (-)
XLOC_023304 NA non-coding downstream 708435 9252734 ~ 9286642 (-)
XLOC_023320 NA non-coding upstream 499421 10497369 ~ 10499902 (-)
XLOC_023323 AL840641.3 non-coding upstream 907224 10905172 ~ 10905286 (-)
XLOC_023324 dre-mir-7147 non-coding upstream 950116 10948064 ~ 10948145 (-)

Expression


Co-expression Network