XLOC_023314 (zgc:171750)


Basic Information

Item Value
gene id XLOC_023314
gene name zgc:171750
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 10003426 ~ 10006158 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046118
CTTGGGTTGCTATGCGTGCTACAACAATGTGGATTTTAAGttattctttAGCAGTACTTTTAGCCCATGGTGCATGTGATGACTATGATGGTATTGCAActgTTTATGCCTACAACCCTGGTAGCAGTGGAGTCAGTCCTATGTCTAATCCCAGTCAGTCCATGCAGGAAGTGAAACAAAGTCTCTCTAACATTTATGGCTTGACTGATGTAACTGGACCAATCAGCAAGGATGCAGTTAAATGGGGCTTTGACACTACTTATCGCTCTCAGGCTGGCTCTTCAGGCACTCCCATGACAAATGAAAAACCAGGCTCTGAATCGCATACAAGCCAAGAAGGATTTCGTGTTGATTCAGTTGGAACTGGTAGTCTTATTTATGGTTCTGTGGGAAATGCAGTGAGTATGGGCATGTCTGGATATGATTCAAGTCCGTCAACTACTGTCCAAGGCGCTGAAGTCATCAGTTCTTCTGTCCTGAGCCCATTGCAGCAGAGCAGCTATTCTGTTTCTAAGCCAGTGCAGGTAGTTTCCTCAATTCCACTTCAAATTGGCAGTACATCTGTGGTGAAGCCCAGCAGCCAACAGTTCGTGCAGACTATTTACCAGTCCAGCAATGAGCAACCAGCAAGTTCTGGAACCATAGCCCAGTCTAACCCTCTGCAGTTATCCCTGCCCAGTGGCCAACAAATATCTCAGACTAGCTTGCAGTTTGCAGTGCCCTCTGGTAGATGGCCCCTTAAGCCTCTGAAAGGTAAACACCACCATCAAACTGGTTCCAGGCCAGTTCACAATGCAGCAATCAGCTCCTCCAAACCTTCCAAAGCCTCACAACCTAGCTTATCAATACTACAGTATGGTAGTGTGCCAAGTGACCTAGCTGTGGCTAGCTATGAACTTGTGAGCCAGTCAGGCAGCCAGCAATCAGCCCAGCCCAGTGGCCAAACTGTGAATCAACCAGGCATCATACAGACTCCCAGTGTCATTGACATCTCTGTGGTCCAGCCCAGTAGCCAGCTGATTCAACAGGCAGTTGATGCCTCTGTGGCCCAGGTCTCCAGCCAGCAGCTATTACAGGGCAGTCAATCGGTTTCCCAGTCAAATAATGTGGAAACTGTAGATGgaagttttgtttttgtggcaCAGCCAAATGGACTGACTCCTCTCAAGCATCATAAAGGTAAACATCACTTTGGGTCAAAACCTTCCAGTAATAGTCCTCTTCAGGCACTAACATTTACTTCTGTAGATCAGTCCAGCAGCCAAATACCAGTACAAACCATCTACCAAACTGGGCCCCAAGCAGTTCTTCAACTGCCAGTACAAGCCAACTACCAATCTTCACCTCCATCCAAATGGCAAACACTGGTACAGGGTAGTCACCAGTCAGAGGTTCGGCCTACTTCCCAGCAGCAAGGAAAAACCAACTACCAATCTGGGCCCCGGTTTGTCGTTCAACAACCAGCACAAACAGTCCACCAGTCTGCTAGCCAGCCCACTGTGCCACAACTAGTAGAATCCATCTACCAGTCTGCTTCCCAACAGCCAGCCCAAGCTAGCTACCAGTTGGTGGAACAGCTAGGTGTCCAACAGCCAGCACAGGTCAGCTCATCTGTAGGCCATCTGCAAGCAGGACAGTCCAGCTATGAGTATGTTGTCAACCAGAATGGGCAAACCCTTTTCAAGCCAGTGCAGTCCCATGGGATTCATCAGATTGGCTCCAAACTGTATTCATGCCATGAACTACCACAGCACAGTTACAAGCGGAGACATCACTCTCCATCTACACACAGTCTTCCAAACGCAGCTCAGGTTATCAAGCCTGTTATTTTGCCCAGTGACCCGATTCCTGTGGATGTCAACTTCCCTAGCCCCCTCACATCTACTTTCAGACCTGCACATCTGCCTAGACATCCTAGCTTGCAGTCTGTAGTGCTTCAAAGTGAGCAGCCAGGTGTGCTAGAGATCCAACCCAGTGGTTTGTCTCATGCCAAGCCTGGACCAGTGAGTTATACTTTTGTATCTCAGCCCACTGGTCATCCTTCAAGACCATTGCAGCTGCTTAGCTACCAGCCTCCAGCAAAGCTATGGCAAGGTCTGTTTGGGCCCATAGTCAAGCCTAACCAACTGGGGTATTCCAGTCTTGAGGCACAAGTTCTCCCTAGCCATGTGTCTTCTGTTCCTGTACAGTTCGTTTCCCAGCCTCAAATGCTCCCAGCTAGTCTGTCTATCAGTCAGTCCAGCTCTTCCTCAGCTGTGCCAGTGCAGACCAGCTATCAGCCTCAGGTAGTGTCAAGTTCTGAGACTGTCTTCCAGCCTGTATCACAGACTACTTCAGTGGTTGTGCCATCAAGTTCCCTAACCTGGAGCACTCCAATGGCATCAAACTACGGGTCCGTGTTGCAGTCAGTGCAACCTGAACTTCCAATtccagtacaggtgaattatcaGACTGTCTCAGATCAAAATGCTCCTGGACCTGCTGGAAGCAATAGGCATTCATCATGGAAGTTGCTTAAGCTGTTGCAACAAGTCAAGTCCTAGGTGTTTGTTTGCGGTTTCCTTATGCTCGA

Function

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-071004-30 No description available

Ensembl:

ensembl_id ENSDARG00000078638

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046118 True 2572 mRNA 0.49 3 10003426 10006158

Neighbor

gene id symbol gene type direction distance location
XLOC_023313 si:ch211-146l10.7 coding downstream 5478 9995077 ~ 9997948 (-)
XLOC_023312 zgc:171977 coding downstream 12140 9976212 ~ 9991286 (-)
XLOC_023311 vps41 coding downstream 43110 9895851 ~ 9960316 (-)
XLOC_023310 NA coding downstream 128735 9870547 ~ 9874691 (-)
XLOC_023309 BX649325.1 coding downstream 290816 9712495 ~ 9712610 (-)
XLOC_023315 zgc:171474 coding upstream 4472 10010630 ~ 10014624 (-)
XLOC_023316 zgc:173856 coding upstream 12495 10018653 ~ 10021341 (-)
XLOC_023317 CR391965.1 coding upstream 249756 10255914 ~ 10256030 (-)
XLOC_023318 NA coding upstream 263698 10269856 ~ 10275658 (-)
XLOC_023319 ankha coding upstream 342989 10349147 ~ 10394277 (-)
XLOC_023665 dre-mir-735 misc upstream 28171803 38177961 ~ 38178027 (-)
XLOC_023307 NA non-coding downstream 391070 9507674 ~ 9612356 (-)
XLOC_023304 NA non-coding downstream 716784 9252734 ~ 9286642 (-)
XLOC_023320 NA non-coding upstream 491211 10497369 ~ 10499902 (-)
XLOC_023323 AL840641.3 non-coding upstream 899014 10905172 ~ 10905286 (-)
XLOC_023324 dre-mir-7147 non-coding upstream 941906 10948064 ~ 10948145 (-)

Expression


Co-expression Network