XLOC_023600



Basic Information


Item Value
gene id XLOC_023600
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 34863040 ~ 34863601 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00047232
TATGCCATTCCTAATTAATTTCCAAAGTTGATCAAAAGgttatttcaacatttttcattCATTGGATGTGTTATGCGGTTTcacctttctttctctctctctctctctggctgcATGAATGAGTCTGTGGGCGTTTCTCCCTGTTGTGCATGGAGCATTGCTGTTGGAATGGGACAAGAACCAAATTAACAGACGGGAGAGTATAGCCCTCATACGAGCATGCCTGAtaagttggtgtgtgtgtgtttctttctgtTGCTTTTGTGTACTAGCTTGAATACTATGCCGTCTGTTTTATGTAACCAGCATGCGGCTTGAATGAACGACAGGGTTCCTTTTTTTCCTTGCCATTGTgcttaaaacaagactattttaatgtatttttagagTGTGCAAGTATACAGAGTTTACTTGACGTTTTATATAGAATATA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00047232 True 433 lncRNA 0.39 2 34863040 34863601

Neighbor


gene id symbol gene type direction distance location
XLOC_023599 ctnna1 coding downstream 182084 34488316 ~ 34680956 (-)
XLOC_023598 agap3 coding downstream 527775 34139146 ~ 34335265 (-)
XLOC_023597 CT583690.1 coding downstream 747526 34112756 ~ 34115514 (-)
XLOC_023596 NA coding downstream 793282 34057279 ~ 34069758 (-)
XLOC_023595 asic1c coding downstream 828109 33868109 ~ 34034931 (-)
XLOC_023601 NA coding upstream 20300 34883901 ~ 34949036 (-)
XLOC_023602 NA coding upstream 361883 35225484 ~ 35227688 (-)
XLOC_023603 sntg1 coding upstream 369115 35232716 ~ 35282568 (-)
XLOC_023604 NA coding upstream 570215 35433816 ~ 35445157 (-)
XLOC_023605 ube2v2 coding upstream 658700 35522301 ~ 35534273 (-)
XLOC_023665 dre-mir-735 misc upstream 3314360 38177961 ~ 38178027 (-)
XLOC_023594 NA non-coding downstream 1023679 33834824 ~ 33839361 (-)
XLOC_023587 NA non-coding downstream 1192548 33549862 ~ 33670492 (-)
XLOC_023581 NA non-coding downstream 1641865 32707441 ~ 33221175 (-)
XLOC_023608 NA non-coding upstream 845966 35709567 ~ 35724376 (-)
XLOC_023610 NA non-coding upstream 1015160 35878761 ~ 35922389 (-)

Expression



Co-expression Network