XLOC_002361


Basic Information

Item Value
gene id XLOC_002361
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40122374 ~ 40281002 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005935
GATTCGTCGTAGTGTCGAACAACGCTTTAAAGCGCTTAGACTTGTGGGAGAAAAACAACCTTGAACATAAAAGTGAGAATTGTCTTACTAACAACACCACACATAATTCCTAAAATACGAAGCACTGATTTATCATTCAGCATGATTTCGCACGATTACGTGAGGTGTCACATCTTGAATTCACAAATCACTCGAGTGAGTTCGTCAGTTTGCCAAACCCTGCAGTCCAGCGCATGTCCAGCTTCACGAACAGACCCTCCTGACCGTCCCGAGACGAACTTTCCTTCTCCCTGGAGCTTATAAACACTGCTTTGTGGATAAACATGGCTTGTACGGTTGGAGGTCAGATTATCCCGCAGTTAAATGTGGAGGAGGCGCCGGATGACGGAAGCCCGACTAGGAGCATCTCCAGCCGGCGAAGCAAAGCGTCCTTCTCCCCCTTCAGCTCCAGGAAACAACAGAGCCAGCAGAGCAGCCTGCAGAGCAGCCATGAGGAAGAGTCCACACGCTACCTGAGCCCCAACACACGTGAGGACAgggaTTAGCTGCCTCACTTCACTTCTCCAGTGCGCTCTCTAACGCAGCCTGACAGTCACCTCATCACCTGACTCCTggtgctctgctctgattggctgtctcCTGTCCGTGTCAGTGAGCTCAGTGATGCCGAGGGGGCGGCTCATATGGCAGCTCTCAGAGGCTGTCGGGACGCGTCTTTAAACATAGCACAAATACACCCCGGGTTCTCCTCATCTGCTGTTCTCCACTCAGACCCCCAGAGACACAGCAAGGGCACAGGAATATGATGACGCAACCCCATTACATGTGCAGTGCTGATATTTCACATTATTGCTGAC
>TCONS_00005936
TCCAGCGCATGTCCAGCTTCACGAACAGACCCTCCTGACCGTCCCGAGACGAACTTTCCTTCTCCCTGGAGCTTATAAACACTGCTTTGTGGATAAACATGGCTTGTACGGTTGGAGGTCAGATTATCCCGCAGTTAAATGTGGAGGAGGCGCCGGATGACGGAAGCCCGACTAGGAGCATCTCCAGCCGGCGAAGCAAAGCGTCCTTCTCCCCCTTCAGCTCCAGGAAACAACAGAGGCCTGTTCCGGCTCACTTTACCCACGGCCCGTTCCAGTCCTGTGCTCATTATTGACTGTTTGTCCATTACCTGTGACCTCTACGAGACGTCCAGCAGCCCCGCCACAGTTACTGTGACGTCATATCCTGTCTGAGATCATATTGTGCAGTTTCTGCATTAAACAGAAGAGGAAGTCTCAGATCAACCCATAGGTCAGACAATGCAGGTGAATTGAAAAACAGTTTAcgctttatttaattatttactttattccATTTTGTTTTAATGTACAATTATCACTATTAACAAACTGTTAAGTATGACTTTTGCCATAAAATCTACTATTTACTGCTTATTCATAGTCATTGAGGTAGTAGTTGGTTTTAGGATTAGGGATATATAGTAAAATCATACAGAATATGTATTTTATAAGTAATaatagggctgtcaaatgattaattgTGATATAAACTGTGAATAAtatctatatatgtgtgtatatatttgagtaaatgtttatttatatttctaaattaaataattatctttgggcgaggcagtggtgcagtaggtagtgctgtcgcctcacagcaagaaggttgctgggttgctggttcgaacctcggctctgttggtgtttctgtgaggagtttgtatgttctccctgccttgcgtgggttttctccgggtgctccggtttcccccacagtccaaagacatgtggtacaggtgaattgggtaggctaagttgtccgtagtgtgtgtgtgtgtgtg
>TCONS_00004476
ACGCCTTTCAGTTTCTCATTCATTCCGGTCATTTAAAACTTAACGACTGCATCTTACAAAACGATGGCTACTTAATATGTAAATAAAGGGAGCTCTCCTGTTTTTGGGAGGAAATCTTCTATAAAACCAAGCATGTCAGCACTGAGCCATCTCACAGGAAGTGCTGAAGTCAGCTCAGGCCAGGTGTGGACTCACTGATCTGTATTTGGACTCATGTGAAACCGGGCAGAAGCGGAACCATGTCCGAGACCCTCCAGCTGCCCGCACTGCAGATCCAGGGTCCGGAGTGCAATGGCTCCGAGGTGGATCCAAACCTCTCCAGCTCCTCCAGCCCGGCTCTGCGGCGCAAGCGCTTTAAAATGCGCAGGATGAAGAACGTGATGAGCGAAAAGGAGCAACTGGAGAAGGAGCAGCTTCAGCGTTCAGGCTCCAAGGAGTACCTGCAGCTTCCATCCATTGAGATCACGCCATCCAGCGACGAGGACGCGGCCTGGTCCAGCTGCTCCACACCCAGCGCTTCACCTCAGCGCAGACGCTTCCTCCTGCGCAAGTGGTTGAGGGGAGGAGAGAAGAAAGAGCACGGCAGTGAGAGCAGCAGCCAGCAGAGCAGCCTGCAGAGCAGCCATGAGGAAGAGTCCACACGCTACCTGAGCCCCAACACACGTGAGGACAgCACTGCCAGTAACTCGAACCGCAGCACGCCGGCCTGCTCACCCGTCCTGCGTAAACGCTCACGCTCCCCAACGCCCCAGAGTCCCGAGGGAGAGAACATGGTGGAGAAGGGCTCGGATCACTCCTCAGATAAATCCCCCTCCACCCCAGAGCCAGCCGTCCAGCGCACATACAGCCAGTCGCTTCACACCACCCGCACCGGAGGGAAAAACTCCAAGAAAAGTCAGAGCTGGTATAACgtttTGAGCCCCACATACAAGCAGCGGAATGAAGACTTCAGGAAACTCTTTAAGCAGCTGCCCGACACAGAGCGCCTCATTGTGGACTACTCCTGTGCCCTGCAGAGAGATATCCTCCTGCAGGGTCGCCTCTACCTCTCTGAAaactggatctgtttttatagCAACATATTCCGCTGGGAAACGCTGCTGACGGTGAGGTTAAAAGATGTTTGCTCCATGACGAAGGAGAAGACGGCTAGACTTATTCCCAATGCAATCCAGCTGTGCACGGACAATGAAAAGCACTTTTTTACCTCATTCGGAGCGAGAGATCGGACGTACATGATGATGTTCAGGCTCTGGCAAAATGCTCTGCTGGACAAGcCATTATGTCCCAAAGAGCTTTGGCATTTTGTCCATCAGTGTTATGGGAATGAGCTGGGTCTGACCAGTGACGATGAGGATTATGTACCTCCTGATGACGACTTCAACACCATGGGGTACTGTGAGGAGATTCCTGCTGAAGACAACGAGGCCAATGACAACTGCAATAAAACCCCAGACGCCAAGATGGACATCAGTCCCCAGCTCCATCGGAAGGTGTTTCCCAACAGCAGCCTGAACTCCACAGACAGCACTGATGCTCCGCTCAATTTTGATGTGCCCCCGGTGGAGGACTTTACCAACTGCATCCCAGAAGACCTCCTGCCCCTGACCTTACCTGATAATAAGCTGTCAGAGACCGGTGGCTCCGCCCATGTCCCCGCCCCCTCACCCTCGCTTGATTTTAATGATAATGAGGATCTTCCCACTGAACTCAGCGACTCCTCAGAAACACACGATGAGGCAGGGGAAGTTCAGGCCTTCCAGGAAGATCTGAATGGGAAACTGTACATTAATGAAGTGTATAAGTTCAGTGTGGATAAACTGCACGACATCCTGTTCACTGAATCACAGTTCATGAGGGAGTTTCTGGAGCAGAGACGCTTCTCagATGTGGTCTATCACCCATGGAGGAAAGAGGACACCGGTAATCAGACCAGAGAGATCATGTACACCATCTCCCTCTCCAACCCACTGGCCCCAAAGACGGCCACAGTGACAGAGACGCAGactttgCACAAGGCCAGTCAAGTGAGCGAGTGCTACATCATTGACGCTGAGGTCATTGCTCACGATGTCCCCTATCATGACTATTTTTACACACTCAACCGCTACATGCTCACTAGAGTCGCAAGGAACAAGTGCCGCCTGAGAGTGTCAGCTGAACTGCGCTACAGGAAGCAGCCATGGGGATTAGTCAAGGGCTTCATTGAGAGAAACTTCTGGAGTGGTCTGGATGAATATTTTAGGTATTTAGAGCTGGAGCTGAATAAGGTACAGCTGGTGCTATCTGAACAATCTCCCAAATCCAAAGCATTACGCACAGCTACAGTGAGGCGGAGGAAGCGGCCCCTGACGCACATGAGGCCGCAGCACATGGACGAGGCCCTCAGCCCAGTCACCACACCTGAGGATGAGAAGAGCGTCATCCAGCGCATCAAACATGTGGCAGGATCCACACAGACCAGACACATGCCAGACCACGCGTCTGAAGGCCTGGCTCTCTACAGCGTTTCCAAACTCCTGCTCATCATCAGCTCTGTTCTGGTGCTGCTGGTCTTTTTGAACTTGATGCTGTTTTATAAGTTATGGATGCTGGAATACACGGCTCAGAGTTTGGCCTCCTGGCAGGGTCTCAGGTCTCATGAAAGTAAACTTCCACAAACACAGATTGAATGGGCTCAGCTTTTGGAATCTCAGCAGCGTTACCATGAAAGCGAGCTGGAAAAATGGAGGGAAATAATCAAGTCATCTGTGCTGTTATTAGATGAGATGAGGGAGTCTCTAATGAAGCTGCAGAAAGGTATCGGGTTGAGAGACTATGATTCAGACAGTGAAGAAAGAAGAAGTCACTATCACTGA
>TCONS_00004477
gtctgtatgtggtgGTGGTGTACAGCAGCTCGAACTGAAATAGAACAAGACCCTAAACAATAAATTTCTCTCATCCATTCGCAGTGTTTACCGTTCATCTGTATTAAGGGATTAGAAGACCAGCTGTCGACAGCCGTAGTCCCACACATACAAACAgcttttgtgaattgtggggacattccatacTTTTCCCttgttttttatacagtataaactgtattttctattacCACATCCCAAACCTACACCTAACCCTTGCCCTTAtgcagttttactttctgaaacaATCTATAAGCCTTTTTAAAAATGGGGACGCaggcaatgtcctcatatttcactaTCTTCTTGTGATATCTGTCATACCCATGgcattttatgcatttatgtcCTGATATTTCATaaatatgcgcacacacacagttaGAGGAGAGCCGACAGGAATCTCTTTGAGTCAGAAAGGAAGCAGGGGGAGTGGTTTAAATGTCTGAGCATGCTCAGTGAGCGGCAGATTGGGATGAGAGAAGCTCTCATctgcaaagagagagagagggagtgagAGAAGCTACTGCATTTCAAAGAGGTGCACATGAGCGCTACACACACACTGGATGTGAAAGTATGGCTCACCGGCACATTCATGCACAATGAGGCTTTCTGAGTCAGGCTGATCGCCAGCATTTGGGGATCACCAGAACCGACCCGGATTAAAGATCCCGCTCGGGATGCCTTGGGAAAGGCGGCCCGTGAAATGGGAAGATGACACTGTGGGATCAGGACAGCCTGTACTGCACTAATGAAAGGCTTCAAGCTCGCCTGCACTGCCAGTAACTCGAACCGCAGCACGCCGGCCTGCTCACCCGTCCTGCGTAAACGCTCACGCTCCCCAACGCCCCAGAGTCCCGAGGGAGAGAACATGGTGGAGAAGGGCTCGGATCACTCCTCAGATAAATCCCCCTCCACCCCAGAGCCAGCCGTCCAGCGCACATACAGCCAGTCGCTTCACACCACCCGCACCGGAGGGAAAAACTCCAAGAAAAGTCAGAGCTGGTATAACgtttTGAGCCCCACATACAAGCAGCGGAATGAAGACTTCAGGAAACTCTTTAAGCAGCTGCCCGACACAGAGCGCCTCATTGTGGACTACTCCTGTGCCCTGCAGAGAGATATCCTCCTGCAGGGTCGCCTCTACCTCTCTGAAaactggatctgtttttatagCAACATATTCCGCTGGGAAACGCTGCTGACGGTGAGGTTAAAAGATGTTTGCTCCATGACGAAGGAGAAGACGGCTAGACTTATTCCCAATGCAATCCAGCTGTGCACGGACAATGAAAAGCACTTTTTTACCTCATTCGGAGCGAGAGATCGGACGTACATGATGATGTTCAGGCTCTGGCAAAATGCTCTGCTGGACAAGcCATTATGTCCCAAAGAGCTTTGGCATTTTGTCCATCAGTGTTATGGGAATGAGCTGGGTCTGACCAGTGACGATGAGGATTATGTACCTCCTGATGACGACTTCAACACCATGGGGTACTGTGAGGAGATTCCTGCTGAAGACAACGAGGCCAATGACAACTGCAATAAAACCCCAGACGCCAAGATGGACATCAGTCCCCAGCTCCATCGGAAGGTGTTTCCCAACAGCAGCCTGAACTCCACAGACAGCACTGATGCTCCGCTCAATTTTGATGTGCCCCCGGTGGAGGACTTTACCAACTGCATCCCAGAAGACCTCCTGCCCCTGACCTTACCTGATAATAAGCTGTCAGAGACCGGTGGCTCCGCCCATGTCCCCGCCCCCTCACCCTCGCTTGATTTTAATGATAATGAGGATCTTCCCACTGAACTCAGCGACTCCTCAGAAACACACGATGAGGCAGGGGAAGTTCAGGCCTTCCAGGAAGATCTGAATGGGAAACTGTACATTAATGAAGTGTATAAGTTCAGTGTGGATAAACTGCACGACATCCTGTTCACTGAATCACAGTTCATGAGGGAGTTTCTGGAGCAGAGACGCTTCTCagATGTGGTCTATCACCCATGGAGGAAAGAGGACACCGGTAATCAGACCAGAGAGATCATGTACACCATCTCCCTCTCCAACCCACTGGCCCCAAAGACGGCCACAGTGACAGAGACGCAGactttgCACAAGGCCAGTCAAGTGAGCGAGTGCTACATCATTGACGCTGAGGTCATTGCTCACGATGTCCCCTATCATGACTATTTTTACACACTCAACCGCTACATGCTCACTAGAGTCGCAAGGAACAAGTGCCGCCTGAGAGTGTCAGCTGAACTGCGCTACAGGAAGCAGCCATGGGGATTAGTCAAGGGCTTCATTGAGAGAAACTTCTGGAGTGGTCTGGATGAATATTTTAGGTATTTAGAGCTGGAGCTGAATAAGGTACAGCTGGTGCTATCTGAACAATCTCCCAAATCCAAAGCATTACGCACAGCTACAGTGAGGCGGAGGAAGCGGCCCCTGACGCACATGAGGCCGCAGCACATGGACGAGGCCCTCAGCCCAGTCACCACACCTGAGGATGAGAAGAGCGTCATCCAGCGCATCAAACATGTGGCAGGATCCACACAGACCAGACACATGCCAGACCACGCGTCTGAAGGCCTGGCTCTCTACAGCGTTTCCAAACTCCTGCTCATCATCAGCTCTGTTCTGGTGCTGCTGGTCTTTTTGAACTTGATGCTGTTTTATAAGTTATGGATGCTGGAATACACGGCTCAGAGTTTGGCCTCCTGGCAGGGTCTCAGGTCTCATGAAAGTAAACTTCCACAAACACAGATTGAATGGGCTCAGCTTTTGGAATCTCAGCAGCGTTACCATGAAAGCGAGCTGGAAAAATGGAGGGAAATAATCAAGTCATCTGTGCTGTTATTAGATGAGATGAGGGAGTCTCTAATGAAGCTGCAGAAAGGTATCGGGTTGAGAGACTATGATTCAGACAGTGAAGAAAGAAGAAGTCACTATCACTGA
>TCONS_00004478
ATGGCCACCAGCACTGCCAGTAACTCGAACCGCAGCACGCCGGCCTGCTCACCCGTCCTGCGTAAACGCTCACGCTCCCCAACGCCCCAGAGTCCCGAGGGAGAGAACATGGTGGAGAAGGGCTCGGATCACTCCTCAGATAAATCCCCCTCCACCCCAGAGCCAGCCGTCCAGCGCACATACAGCCAGTCGCTTCACACCACCCGCACCGGAGGGAAAAACTCCAAGAAAAGTCAGAGCTGGTATAACgtttTGAGCCCCACATACAAGCAGCGGAATGAAGACTTCAGGAAACTCTTTAAGCAGCTGCCCGACACAGAGCGCCTCATTGTGGACTACTCCTGTGCCCTGCAGAGAGATATCCTCCTGCAGGGTCGCCTCTACCTCTCTGAAaactggatctgtttttatagCAACATATTCCGCTGGGAAACGCTGCTGACGGTGAGGTTAAAAGATGTTTGCTCCATGACGAAGGAGAAGACGGCTAGACTTATTCCCAATGCAATCCAGCTGTGCACGGACAATGAAAAGCACTTTTTTACCTCATTCGGAGCGAGAGATCGGACGTACATGATGATGTTCAGGCTCTGGCAAAATGCTCTGCTGGACAAGcCATTATGTCCCAAAGAGCTTTGGCATTTTGTCCATCAGTGTTATGGGAATGAGCTGGGTCTGACCAGTGACGATGAGGATTATGTACCTCCTGATGACGACTTCAACACCATGGGGTACTGTGAGGAGATTCCTGCTGAAGACAACGAGGCCAATGACAACTGCAATAAAACCCCAGACGCCAAGATGGACATCAGTCCCCAGCTCCATCGGAAGGTGTTTCCCAACAGCAGCCTGAACTCCACAGACAGCACTGATGCTCCGCTCAATTTTGATGTGCCCCCGGTGGAGGACTTTACCAACTGCATCCCAGAAGACCTCCTGCCCCTGACCTTACCTGATAATAAGCTGTCAGAGACCGGTGGCTCCGCCCATGTCCCCGCCCCCTCACCCTCGCTTGATTTTAATGATAATGAGGATCTTCCCACTGAACTCAGCGACTCCTCAGAAACACACGATGAGGCAGGGGAAGTTCAGGCCTTCCAGGAAGATCTGAATGGGAAACTGTACATTAATGAAGTGTATAAGTTCAGTGTGGATAAACTGCACGACATCCTGTTCACTGAATCACAGTTCATGAGGGAGTTTCTGGAGCAGAGACGCTTCTCagATGTGGTCTATCACCCATGGAGGAAAGAGGACACCGGTAATCAGACCAGAGAGATCATGTACACCATCTCCCTCTCCAACCCACTGGCCCCAAAGACGGCCACAGTGACAGAGACGCAGactttgCACAAGGCCAGTCAAGTGAGCGAGTGCTACATCATTGACGCTGAGGTCATTGCTCACGATGTCCCCTATCATGACTATTTTTACACACTCAACCGCTACATGCTCACTAGAGTCGCAAGGAACAAGTGCCGCCTGAGAGTGTCAGCTGAACTGCGCTACAGGAAGCAGCCATGGGGATTAGTCAAGGGCTTCATTGAGAGAAACTTCTGGAGTGGTCTGGATGAATATTTTAGGTATTTAGAGCTGGAGCTGAATAAGGTACAGCTGGTGCTATCTGAACAATCTCCCAAATCCAAAGCATTACGCACAGCTACAGTGAGGCGGAGGAAGCGGCCCCTGACGCACATGAGGCCGCAGCACATGGACGAGGCCCTCAGCCCAGTCACCACACCTGAGGATGAGAAGAGCGTCATCCAGCGCATCAAACATGTGGCAGGATCCACACAGACCAGACACATGCCAGACCACGCGTCTGAAGGCCTGGCTCTCTACAGCGTTTCCAAACTCCTGCTCATCATCAGCTCTGTTCTGGTGCTGCTGGTCTTTTTGAACTTGATGCTGTTTTATAAGTTATGGATGCTGGAATACACGGCTCAGAGTTTGGCCTCCTGGCAGGGTCTCAGGTCTCATGAAAGTAAACTTCCACAAACACAGATTGAATGGGCTCAGCTTTTGGAATCTCAGCAGCGTTACCATGAAAGCGAGCTGGAAAAATGGAGGGAAATAATCAAGTCATCTGTGCTGTTATTAGATGAGATGAGGGAGTCTCTAATGAAGCTGCAGAAAGGTATCGGGTTGAGAGACTATGATTCAGACAGTGAAGAAAGAAGAAGTCACTATCACTGA
>TCONS_00004479
ATTTTGGTTTATTTATcggacttttcttttttttttcctgtttctcCAGCACTGCCAGTAACTCGAACCGCAGCACGCCGGCCTGCTCACCCGTCCTGCGTAAACGCTCACGCTCCCCAACGCCCCAGAGTCCCGAGGGAGAGAACATGGTGGAGAAGGGCTCGGATCACTCCTCAGATAAATCCCCCTCCACCCCAGAGCCAGCCGTCCAGCGCACATACAGCCAGTCGCTTCACACCACCCGCACCGGAGGGAAAAACTCCAAGAAAAGTCAGAGCTGGTATAACgtttTGAGCCCCACATACAAGCAGCGGAATGAAGACTTCAGGAAACTCTTTAAGCAGCTGCCCGACACAGAGCGCCTCATTGTGGACTACTCCTGTGCCCTGCAGAGAGATATCCTCCTGCAGGGTCGCCTCTACCTCTCTGAAaactggatctgtttttatagCAACATATTCCGCTGGGAAACGCTGCTGACGGTGAGGTTAAAAGATGTTTGCTCCATGACGAAGGAGAAGACGGCTAGACTTATTCCCAATGCAATCCAGCTGTGCACGGACAATGAAAAGCACTTTTTTACCTCATTCGGAGCGAGAGATCGGACGTACATGATGATGTTCAGGCTCTGGCAAAATGCTCTGCTGGACAAGcCATTATGTCCCAAAGAGCTTTGGCATTTTGTCCATCAGTGTTATGGGAATGAGCTGGGTCTGACCAGTGACGATGAGGATTATGTACCTCCTGATGACGACTTCAACACCATGGGGTACTGTGAGGAGATTCCTGCTGAAGACAACGAGGCCAATGACAACTGCAATAAAACCCCAGACGCCAAGATGGACATCAGTCCCCAGCTCCATCGGAAGGTGTTTCCCAACAGCAGCCTGAACTCCACAGACAGCACTGATGCTCCGCTCAATTTTGATGTGCCCCCGGTGGAGGACTTTACCAACTGCATCCCAGAAGACCTCCTGCCCCTGACCTTACCTGATAATAAGCTGTCAGAGACCGGTGGCTCCGCCCATGTCCCCGCCCCCTCACCCTCGCTTGATTTTAATGATAATGAGGATCTTCCCACTGAACTCAGCGACTCCTCAGAAACACACGATGAGGCAGGGGAAGTTCAGGCCTTCCAGGAAGATCTGAATGGGAAACTGTACATTAATGAAGTGTATAAGTTCAGTGTGGATAAACTGCACGACATCCTGTTCACTGAATCACAGTTCATGAGGGAGTTTCTGGAGCAGAGACGCTTCTCagATGTGGTCTATCACCCATGGAGGAAAGAGGACACCGGTAATCAGACCAGAGAGATCATGTACACCATCTCCCTCTCCAACCCACTGGCCCCAAAGACGGCCACAGTGACAGAGACGCAGactttgCACAAGGCCAGTCAAGTGAGCGAGTGCTACATCATTGACGCTGAGGTCATTGCTCACGATGTCCCCTATCATGACTATTTTTACACACTCAACCGCTACATGCTCACTAGAGTCGCAAGGAACAAGTGCCGCCTGAGAGTGTCAGCTGAACTGCGCTACAGGAAGCAGCCATGGGGATTAGTCAAGGGCTTCATTGAGAGAAACTTCTGGAGTGGTCTGGATGAATATTTTAGGTATTTAGAGCTGGAGCTGAATAAGGTACAGCTGGTGCTATCTGAACAATCTCCCAAATCCAAAGCATTACGCACAGCTACAGTGAGGCGGAGGAAGCGGCCCCTGACGCACATGAGGCCGCAGCACATGGACGAGGCCCTCAGCCCAGTCACCACACCTGAGGATGAGAAGAGCGTCATCCAGCGCATCAAACATGTGGCAGGATCCACACAGACCAGACACATGCCAGACCACGCGTCTGAAGGCCTGGCTCTCTACAGCGTTTCCAAACTCCTGCTCATCATCAGCTCTGTTCTGGTGCTGCTGGTCTTTTTGAACTTGATGCTGTTTTATAAGTTATGGATGCTGGAATACACGGCTCAGAGTTTGGCCTCCTGGCAGGGTCTCAGGTCTCATGAAAGTAAACTTCCACAAACACAGATTGAATGGGCTCAGCTTTTGGAATCTCAGCAGCGTTACCATGAAAGCGAGCTGGAAAAATGGAGGGAAATAATCAAGTCATCTGTGCTGTTATTAGATGAGATGAGGGAGTCTCTAATGAAGCTGCAGAAAGGTATCGGGTTGAGAGACTATGATTCAGACAGTGAAGAAAGAAGAAGTCACTATCACTGACGAACAGAATCCCGGGTCAGCAAATCTACATGTACACGTTCAGATGAGCTGAGCCGGGCAGACGGGGCTCGGTAAGTCAACGGTTCTGACGTCACACACTGAACGTCCTCACTTTCTGGATCCTCCAGAATAATCAGTGCGATGAGAGAGCCGAAAAGCGAAGGAACGCAATCTGAGTCCCGCAATTGTGAAAATCTCGTCTTTTCACCCAGGgctaaacaaacaacaacaacaaaccaaAACTATTGAACTGTCTCTGCAAAACGGACACAGACTCTCTGGTTTAAACACTTGGAAAACTCGAGAGGATGTTGGAACTCCTAAGCAtccctttttttgttttgtttttttaaaccttttggaGTCTGGGACCACATAAAGAAAAGATGAAGTCGCTATCAACAAGTGTTACGTggacatatacatatttatttataaaaaagtgaaattgAATGATATTAACTATATGATTTCTATGTAGAGCTATATTTGTTGCCAGAGTTAATTTGTAACAGGCTTCCATGGAGAATCGAGGCTAGATCCTTGATAGCTTGCGCCATGGTGCATCAAACTATATGCAACTGGTTTATCCTCCGCTCTTCGGAGGAAGTACTTCCTCTGATTGGTTGATTCGGAGTGGTAAAAGAGCCAGAGTTACTGAAGTGTGATGGTAGAAGCGTCTACTGAGCAGCTTGGCCGCATTCTAGTTTCCATACTACTAtgcaaataaataagtacatacTTATAAACTATAGTTTAAGACATGAATACTCCATTTTGAGCACGCAGCCTTTCAGAGCatgctaaagcctggtttatatttctgcgtcaagtCATCGGCGTGACCCACAGTGC
>TCONS_00005937
atcgatgtgtatctccacaagtcccaaaccaaATGAGGGAGTCTCTAATGAAGCTGCAGAAAGGTATCGGGTTGAGAGACTATGATTCAGACAGTGAAGAAAGAAGAAGTCACTATCACTGACGAACAGAATCCCGGGTCAGCAAATCTACATGTACACGTTCAGATGAGCTGAGCCGGGCAGACGGGGCTCGGTAAGTCAACGGTTCTGACGTCACACACTGAACGTCCTCACTTTCTGGATCCTCCAGAATAATCAGTGCGATGAGAGAGCCGAAAAGCGAAGGAACGCAATCTGAGTCCCGCAATTGTGAAAATCTCGTCTTTTCACCCAGGgctaaacaaacaacaacaacaaaccaaAACTATTGAACTGTCTCTGCAAAACGGACACAGACTCTCTGGTTTAAACACTTGGAAAACTCGAGAGGATGTTGGAACTCCTAAGCAtccctttttttgttttgtttttttaaaccttttggaGTCTGGGACCACATAAAGAAAAGATGAAGTCGCTATCAACAAGTGTTACGTggacatatacatatttatttataaaaaagtgaaattgAATGATATTAACTATATGATTTCTATGTAGAGCTATATTTGTTGCCAGAGTTAATTTGTAACAGGCTTCCATGGAGAATCGAGGCTAGATCCTTGATAGCTTGCGCCATGGTGCATCAAACTATATGCAACTGGTTTATCCTCCGCTCTTCGGAGGAAGTACTTCCTCTGATTGGTTGATTCGGAGTGGTAAAAGAGCCAGAGTTACTGAAGTGTGATGGTAGAAGCGTCTACTGAGCAGCTTGGCCGCATTCTAGTTTCCATACTACTAtgcaaataaataagtacatacTTATAAACTATAGTTTAAGACATGAATACTCCATTTTGAGCACGCAGCCTTTCAGAGCatgctaaagcctggtttatatttctgcgtcaagtCATCGGCGTGACCCACAGTGCATGTTTTGCACATAGTTGTGCatatatacttctgcatgctgtttgtgttgctctgcaataacacttccaaaacctAGCTGGGAGTAggtgttcctctgtgttgagttttttCTCAGGTGttagttttttctgaacgctaccttaatgtacaggtagctaaaacttgctcattctgaggcaggaaccagcggacgtgcaacaactttaatcatgctgtaaacacaaaacaaaagtttccatccggagctccttcatgagactcgacacttgtaaacaccaGTGATGCCAACTAATTTCAATGAAAAGGCGCTAAGCTCTGTCAGAAAAGTCGCTAAATGTTGCCAGATTacatcatacgtcaatttgcatataaCTGACGTGCAACGTTTTATGCCTCATTAAGACTAGCAGTGACTTGGTAGCTGCCGATCGCTCTGGGTGGCGATCTGCTGCAAACGCAGGGCTGCATCTATACAGCACGAATACAACAAGCCTCTAAATGAGcagagagaggatcacgtgagctccACTGGTGCTCCAAATGGCTGTCGCTCAAAGCCGCCGTACATTTGCATAAAGCTGAatgattctcaactttgttgcgtCGCTCCCCACGCCCACCTGGTCCCCAATGGTCGTTGTCGCTTGTGTAGACGGAGGACGCGGGAAGTAGCTCACTCTGTTCTCTGCTTGTCGCTTTGCTGCTGTGAgtcgcttgtagtgtgaatgtatcagtatagatgtgtagtgaatttgcagtcatctctcagacgtaataaactcaaacaagtttCTAAATTATCTGTGATTATGAAGAAGTCAAAgtaatttgttaaatttaaaacaaagtagaagcagatcggtttgactgtacaagggaaatacctcacactcccagtgctaaatcatttgcaaagacacagaagtataaatcagccttaatgcaTTTATATATCCTGTATTTTACCAGGATAGTCCTATCGTAGCCAGCTAGCTTTAACTACAAACAACAAAACTAGCTAAACTTAACAAAACTAGCTGGACAGATGAAGCCTAATGGCCAACCAttggcttggtgtgtcctggCCCTAAAAAAGTTGATTTCTCTGAAATGCTGTGGTGCTCTCAGCTTAACACAGCAACATTGACTCAACTAATAGTGTGCTAATTTATTCTTATAGAGCGAGTTTCATCATCTCAAAATCTGTGGCCTTTTTAAAATGGGTGTTTAGTCTAAGCCAGACATATTTTTTGTGCTTAACACAAGCttaacatattaatatatttatcgtAACTATATTAAAGCcggcggtggctcagtggttagcactgttgcctcacagcaagaaggttgctggttctagtcccagcggggtcagtaggcatttctgtgtggagtttgaatgttctcccagtgtattcgtgggtttcctccgggtgctctggtttcacccacagtccaaagacatgcactataggggaattgagtaaactaaattgacggaagtgtatgagtgtttgtgtaaatgtgagtgtgtatgggtgtttcccggtactgggttgcggctggaagagcatccgctgtgtaaaacatatgctggaatagttggcggttcattccactgtggtgacccctgataaataagagactaagccgaaggcatatgaatgaatgaatattaaaatctttattttttttgggtAGTTACTAATAAGTGGCTAAATTGTACTacacagaactgtgtgtagtttGTTTATGGCCAATCTTTAGCTCTTTACTTTAGGCTGCTGCTTTTATGCTTCATgtaagttgtttatttatttatttaaatcacattaGCAATCTTATCATCTGTCATAATCAAAAAGCCTATAGAAAATTCACTGGGTTTTTGTTAAGAAAACTTGGTGATGCTAACTTCCCACAAAAATACACCAGCGCTCTGCTAACGCTAATAGTATGGAAATTGGGATGCGTCCATCAAGCCTGTGGTCAACCAATCCTCTCACGCGGTAATGGTTGTGGTCTATCAGCGGTCAACCCCAGCCAACAGCATCTATTTATTTGTGAATGACTTATTGTAACaagaatgtgtttttgttttccctCAGGGGTCAGTTATACCCTGCGGGCTGCAAACCACTTCACATTGCCAAGCTTTGATTTAAAAGCCgttcactttttttgttttccaTGTTGTATGTTGTCTTTGTGTTTTGATGCTGAAACCAGCTGCTGGACAGGTGAGAAATGCACACGGCTCATGTTATTTAAGAAAGAGTCGAACGTGGAATTGATTGTTATGAGATCAGCagttgtttatgtttgtttgtttgtttgtttgtgtgtttagacTGTGAACAATCCAGGTTATGCTTGAATTTACAAAGAAAAAGTGATCAGAATATTTGTCGGCGTAATAAATGTTCAGCCTCATGAAAAAGGTCAAATTAGCTGTAACATCTTGAGATGCCAGATGCAAtgttgtgttttatatatatttatatatatatatatatatatatatatatatatatctcacaccaattcataactttttatttagtggctgattcatatgaatttataatatctcatttgtacaatttagtacaatttgctcatcccccaatggaggttggatttaggggtggggtttggtgccacacctccttttttaaatcgtacattttcagtTCACTCGTACAAACTCaaacgaattagccaccaaactgacaaaacgtaaaatagttacgtttcctcatgagatcaggctgagaaatctgatatatggcaaaTTACAAATCAACACAAGCATTATTCtcattccgctacatgtgtgAACATACGGACGAATGAAATGTGTCTCGCAGGACCACAgagctacattcattcattcattcattcattcattttcttgtcggcttagtcactttattaatccggagtcgccacagcgaaatgaactgccaacttatccatcacgtttttacgcagcggatgcccttccagccgcaacccatctctgggaaacatccacacacactcatacactacagacaatttagcctacccaattggaTGAACGAAATTGTAAAGTGTATGAGtgggtgtaaatgagtgtgtatgggtgttttccagtactaggttgtggctggaagaacattcgctgtgtaaagcatatgctggaatagttggcggttcattccgaccTGGCAATctgtgaaatagagactaagccgaaggaaaatgaatgaatgagtaaatgaatgtaaGTTCATGTTTGGATTTCACAAATATAaactatatgtcatatatgcaaaATTAGGGTTTCCgcaggtcttaaaaggtcttaggACATGAACACAGTATTttcagaacagtttttttttatgtaatttaatgatTCGTCAACACAAAAATGCAGTATCAGCTAATTGAAACTGAAACTTTCTCAAACAAAAGGGCCAGGGTGAAGATTTACAGAAACTTGAGTAACAGTGTGATCGAGTGGCCACCAAAACCAGAGTTTTTACCTCATGACATCAGCTTGGACGCAGTTTTCTCTTCTCTAATTGGTTAACACAGTGAGTTTGCGGCAAATGCGACACTTATTTCACCTCATTCGTAATTCGCCTTCGATTGCAAATTTGCATTGACTTTGTCCATTAAAAAGATCCTAAAAAGGTCTTAATGTACTCagttaaagttaaaattattagcccttctgaattattagcccactgtgTATTTTCCCCCCTAATTTCTGCTTAACAGAGAGcatattttttcaacacttttctaaacataatagttttaataactcatttctaataactgatttatttaatctttgccatgatgacagtaaataatatttgactagatatttttcaagacacttctatgcagcttaaagtgacatttaaaggcttaattaggttaactaggcaggttaggggaattaggcaagttattgtataacaatggtttgttctgtggacaatcaaaaaaattgcttaaaggggctgataattttgaacttaaaatggtatataaaaaaataaaatagctgcttttattctagtcgaaataaaacaaataagactttctccagaagaaaaaatattatcagacatactgtgaaaatttcctgaatctgtttaacatcatttgggaaatatttaaaaaagaagaaaaaaatttccCACAGTGTGCTAataagggtgctaataattctgacttcaactgtatgtgttttatgtatgtgttgattaGCGTAGTTTGATTTAAATTCTACACCGTACATATAtagcatacataaaaaaaaaaaaaaaaaattcaaatgtccgtttactttttttttttcaactattgGAATTgcaaatatgtacatatgtagTTAAATATATTAGCTACAACTTCAAATATGTTCACACAcggccatatatcagatttccaaATAGGTTCTTCTCATGCAAATGCCCTCTCATGACTAGAGAAACCCATCTAATGACGATTATGATTTGTAAATTTGAAGGCTTTCTGGAATCTTCCACTTAATTTTCAACTCAGTGTTAGTTTCTTATTGATGTTGATTCTGGAATCAACGTACATTACTTTAAATTCAGTTTCAGCATCTGGCATCAAACCAACATGTGAATGATGAATGAAATATGGTCTATTGTGATCACTACAAGTCTGTTCAATCTGGATCTTGGATGATCATTTTTTTGTTCTTGTGCTTAAGCAACAGTCCAAAAGGGGGAACCGGGAAATGTTAGATGACAAAAACGTGCTCTGTTTATATACAAGCGAGTCACTTACTGTACGGATTGAGTCACGATTGCGTTCCTAAACACAAATCCAGGACTCTTCATCTTCATAGTCATTAAACTGATATGCAGTATTAAATGTGCAATGTGTGTTCAAGTAGAGTGTGTAAGTGCTCCACATGAACCGTCTGTGAGAATGTATTTACTAGCTGATCCTTCATTTGGTCATGATCTGCTggtttttaaagtgttattttcaGAAGAGTTCTTCAAACAGGAGGGTTGATTTTCATTGGCCGTGACTGTTATGGTGCAGACGGATGGGAAGTTCATATGTCATGTCAATAACAAGAGCAAAACACAAACcgggttatttttattttggaaatatgtaatgtaattgcaaaggttttttattaaactatttaaaatttctttataaaaagtatatatataaacacacacacacacacacacacacacacacacacacgagtataCTGCAATGTATGTATATGTTGTGTACAGTGCACATCCTACATGCGCTGGCCGCTCTGTGGGATCCATGAGAAACtttcagaaaacaaaaaatatctaTATAACTACATTTGTGTTGTTAAGAAATAGGCGGAATGAATAAAAGTATTCAAAAGATATTTAAATTGTCTGGCTCGTGTTATTACCTTCATCATAATTGATAATAATCATACATTATAGTGTGGGAGAAgaaaataattttgttgtttcattATTTGAATGCTTGAATTAGTGTTTATTGTCCTCTTGTCGCTGTTAGCAGATACTGCAAGTACAATTGATTAGCATTACTCTACATAATAGcctttaaaggagacctatttcaacccaggctcattgtggacttcTTTTGCCAGAAAATAGCCGgaaccggta

Function

GO:

id name namespace
GO:0006883 cellular sodium ion homeostasis biological_process
GO:0099643 signal release from synapse biological_process
GO:0042982 amyloid precursor protein metabolic process biological_process
GO:0042983 amyloid precursor protein biosynthetic process biological_process
GO:0042984 regulation of amyloid precursor protein biosynthetic process biological_process
GO:0006906 vesicle fusion biological_process
GO:0048488 synaptic vesicle endocytosis biological_process
GO:0048489 synaptic vesicle transport biological_process
GO:0065008 regulation of biological quality biological_process
GO:0051179 localization biological_process
GO:0007267 cell-cell signaling biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0007269 neurotransmitter secretion biological_process
GO:0001505 regulation of neurotransmitter levels biological_process
GO:0036376 sodium ion export across plasma membrane biological_process
GO:0032940 secretion by cell biological_process
GO:0046903 secretion biological_process
GO:0051234 establishment of localization biological_process
GO:0098916 anterograde trans-synaptic signaling biological_process
GO:0048284 organelle fusion biological_process
GO:0016192 vesicle-mediated transport biological_process
GO:0055067 monovalent inorganic cation homeostasis biological_process
GO:0017156 calcium-ion regulated exocytosis biological_process
GO:0099504 synaptic vesicle cycle biological_process
GO:0023061 signal release biological_process
GO:0061024 membrane organization biological_process
GO:0099536 synaptic signaling biological_process
GO:0099537 trans-synaptic signaling biological_process
GO:0030004 cellular monovalent inorganic cation homeostasis biological_process
GO:0036465 synaptic vesicle recycling biological_process
GO:0097479 synaptic vesicle localization biological_process
GO:0097480 establishment of synaptic vesicle localization biological_process
GO:1903018 regulation of glycoprotein metabolic process biological_process
GO:0030007 cellular potassium ion homeostasis biological_process
GO:0090174 organelle membrane fusion biological_process
GO:0099003 vesicle-mediated transport in synapse biological_process
GO:0006810 transport biological_process
GO:0006811 ion transport biological_process
GO:0006812 cation transport biological_process
GO:0140238 presynaptic endocytosis biological_process
GO:0010559 regulation of glycoprotein biosynthetic process biological_process
GO:0006836 neurotransmitter transport biological_process
GO:0051640 organelle localization biological_process
GO:0051648 vesicle localization biological_process
GO:0016050 vesicle organization biological_process
GO:0045055 regulated exocytosis biological_process
GO:0030672 synaptic vesicle membrane cellular_component
GO:0097060 synaptic membrane cellular_component
GO:0030133 transport vesicle cellular_component
GO:0042995 cell projection cellular_component
GO:0030141 secretory granule cellular_component
GO:0042734 presynaptic membrane cellular_component
GO:0043005 neuron projection cellular_component
GO:0098590 plasma membrane region cellular_component
GO:0044456 obsolete synapse part cellular_component
GO:0120025 plasma membrane bounded cell projection cellular_component
GO:0045202 synapse cellular_component
GO:0005886 plasma membrane cellular_component
GO:0099501 exocytic vesicle membrane cellular_component
GO:0099503 secretory vesicle cellular_component
GO:0071944 cell periphery cellular_component
GO:0097708 intracellular vesicle cellular_component
GO:0097458 obsolete neuron part cellular_component
GO:0070382 exocytic vesicle cellular_component
GO:0031410 cytoplasmic vesicle cellular_component
GO:0008021 synaptic vesicle cellular_component
GO:0031982 vesicle cellular_component
GO:0098793 presynapse cellular_component
GO:0030658 transport vesicle membrane cellular_component
GO:0005391 sodium molecular_function
GO:0005484 SNAP receptor activity molecular_function
GO:0019829 ATPase-coupled cation transmembrane transporter activity molecular_function
GO:0017075 syntaxin-1 binding molecular_function
GO:0022853 active ion transmembrane transporter activity molecular_function
GO:0000149 SNARE binding molecular_function
GO:0019905 syntaxin binding molecular_function
GO:0008556 potassium transmembrane transporter activity, phosphorylative mechanism molecular_function
GO:0015662 ion transmembrane transporter activity, phosphorylative mechanism molecular_function
GO:0042625 ATPase-coupled ion transmembrane transporter activity molecular_function
GO:0042626 ATPase-coupled transmembrane transporter activity molecular_function
GO:0015399 primary active transmembrane transporter activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

ZFIN:

id description
ZDB-GENE-091118-87 Predicted to act upstream of or within lipid transport. Predicted to be located in endoplasmic reticulum membrane and plasma membrane. Predicted to be integral component of membrane. Orthologous to human GRAMD1B (GRAM domain containing 1B).

Ensembl:

ensembl_id ENSDARG00000075383

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005935 False 857 lncRNA 0.51 3 40122374 40198832
TCONS_00005936 False 992 lncRNA 0.43 2 40122599 40134405
TCONS_00004476 False 2858 mRNA 0.52 21 40160502 40274459
TCONS_00004477 False 3001 mRNA 0.49 19 40204175 40274459
TCONS_00004478 False 2196 mRNA 0.51 19 40214877 40274459
TCONS_00004479 False 3089 mRNA 0.48 18 40235959 40275314
TCONS_00005937 True 6665 lncRNA 0.38 2 40274258 40281002

Neighbor

gene id symbol gene type direction distance location
XLOC_002360 BX927333.1 coding upstream 8378 39952995 ~ 40113996 (+)
XLOC_002359 NA coding upstream 204866 39909138 ~ 39917508 (+)
XLOC_002358 smfn coding upstream 217121 39893439 ~ 39905253 (+)
XLOC_002355 kirrel3a coding upstream 280955 39476432 ~ 39841419 (+)
XLOC_002362 git2b coding downstream 3001 40284003 ~ 40317479 (+)
XLOC_002363 gltpb coding downstream 40065 40321067 ~ 40328989 (+)
XLOC_002364 NA coding downstream 254860 40535862 ~ 40536526 (+)
XLOC_002365 si:ch211-238p8.10 coding downstream 267614 40548616 ~ 40549641 (+)
XLOC_002366 CR396590.2 coding downstream 269728 40550730 ~ 40550954 (+)
XLOC_002357 NA non-coding upstream 341525 39780561 ~ 39780849 (+)
XLOC_002356 CR854987.1 non-coding upstream 361495 39760754 ~ 39760879 (+)
XLOC_002354 NA non-coding upstream 728558 39329302 ~ 39393816 (+)
XLOC_002346 NA non-coding upstream 1034521 39084012 ~ 39087853 (+)
XLOC_002367 CR396590.5 non-coding downstream 273915 40554917 ~ 40555131 (+)
XLOC_002373 CR396590.8 non-coding downstream 318933 40599935 ~ 40600502 (+)
XLOC_002375 CR396590.7 non-coding downstream 326699 40607701 ~ 40608717 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) G92148 LOC102215562 non-coding CM030131.1 CM030131.1 16430456 ~ 16430711 (-)
tiger barb (Puntius tetrazona) G77715 NA non-coding NC_056708.1 CM032077.1 15644403 ~ 15647863 (-)
mexican tetra (Astyanax mexicanus) G85338 NA non-coding NC_035905.1 CM008308.1 32290380 ~ 32290622 (+)