XLOC_023617 (esco1)


Basic Information

Item Value
gene id XLOC_023617
gene name esco1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 36177388 ~ 36196077 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046651
GCTAGGTGTCGTTTGACTTTCGCATCCGCAGCGGATTCGCCGAAGAAGACGCATCGCCGGAAGTGAGGCTAAACTTTGCTCCACACAGCGGAAAACAGCTGTTGTTTAGAAACAGGAATAGATAGGATGCCTGGGCAGAAAAGAAAGATGTCTTCTTCTGAACCTGaagttaaaaaaacaaagctgGACCGAAATCTTGTGGAGTCTGATAAATCTCAAAAGCCTAAAAGAGGAAGACCACCAAAAAGTAAAGTGCTGGAAGCACAGCCATCAAGACAGAAACATCAGATAGATTCAAGGGAAGAAAATGGAAAGCCTATTCGACGGTCCTCTCGCTTGAAAACACCACTAAAAAAAGGTGCTAGAGCAAGACGGCGGAAAGATGGGGAGAAGCCTAAAGTCTCTGAGGAGAAGTCCTCTCAAAAAATGCCTGTCCTGAAAAAAGGAAACAAGAAGTATGTTTCAAGAGTAAAGAGAGAAAAGCCCATCATCTCTGAAACCATCAAAACAGTAGCAGCCATGTTCCCTGTGCAAATAGAGCACAATTACGGACGATTGTTTGACATGCAGGCTGAAGAGATCACGCTACCTAAACCTGACAAAATCCATGTGGCTAATAAAAGTGAAATGCAGGCGCTTCACGAAACACAAGCAAGCAAAGCTGAAGAGCAAAAAGAGCTGCACGCTGAGCCTGTTGAGAAAATTACCGTCAGCGTAGATGCAAAAGTAGACGTGATGAGCAAATCTCCTCCACCTCTAGAGGCTCTTTTCAAAGTCATCCAAGAGTCCAGCCTCACTAAACACTCATTCTCTGGCAAAGACATTTCTGATATGGATGAGTTGGAAGTAGTGAACACATGTTCACTGCAGGACAGTGTGCAAAGCACAGACGTGGCCAAAGTGTTTCTTCAAGACTCGGATGCATTTCTGGATGATGATGTAGAGATTGAAAACTGTGTTGTGGAGATTGAAACCTACGAGGATTTGGATGGCGATCAAGGGGAGGTGTCGAAAAAGCAAACAAGCGAATGTGTGACCTGTAAAGAGGTCAATTCTTCACCTTCTTTGCCCCAAGAAAGTGCAACAGACTCTTCTCAAGAGCTTCCAAAAAAGCAAGCGATGAACCCACAGGCTCGAACGAAAGCACGTCTGGCAGCTTTAGCTGAGGAAAGAGCGGCTGCCGCCAAGAAACCCCCACCGAGACACTTCAACCTCCTGGCTCTCTGTGAGGAAATCGCAGATGACATCGCATCTGATGCTCCAGGAGCTTCAGACAAGACAACGAATGAGCAACAACAGGAGGATCATGAATCTGAAGACGTGAGTGAGTGTACGGAAGTCAGTGAATCAAAAGATGCGAGTGAATCGAAGGAAGTGAATGAATCAAAAGACCTGAGTGAATCTAAAGATGCAAGTGAATCTAAGGATGTGTCTGAAAATAAAGAGGTTTCTGAAACTGAGACGTGTGAACCTGAGGAGGTGGTCTCTGAAAACACGGCTCCTCCTGGAACACCTAATGAAGAGACCGCTGATCCCAGGCCTGAGGACGGTACGCCTAAGAAACGTTTTTTTCTTAGCCAGATGTCTGTGCCTCTCAAAACACAGGAGAAGAAGAAACTCTCCCGCTTTCAGAGGCTCAGGCAGGTGGAGCTTCAGCGGGATAAGCTGACTTGGACACGTGTGAAGAAGCTGAAGTCTGATCAGGTCAATCAGGCTGGCTCTCAAAAGGATAGCGAAGCTTCGTCAGTCTCGCCCAGCCCTGCCACCACCCCTGCCCAGGTTCCTACTACAGAAAGTGTGCCAAAAGTGGGCTCGGTTGAACCCAAACGGGTGCTCCCGGCTCAGGCGCCACCCATGCCTAATGGAATCACCAGCCCGAAACCCAAACCAGTGGTGGAGTATAAACCCTACACTCCCAGACGCAAGTATTCACCGGATGACTTTGAGCTCGACGGTTTTGAAGAGGACACCGCTAAACCAGCAGCACCCAAAAATGTGGGTAAAGCAGAACAGTCCCCATCATCAGCTAAAGTGCAGCCCAATCCAGCAGTGGAGAGAAAGCTGTGTGTTCCCACTACCGCAGATAGTAAGTCGAAATCCTCTCCTCAGCAAGAAACTGCCCAACAAACACAACTGGAAAACAGCAACAGTGTTGAACCAGAACAGAAGAAAGAGGACAAAAACAGTCCCAAACCTGAAAGTCCAGCAGCACAGTCCAGCAATGAAGCGGGTCAGAAGGCGTTTGGTGCGGTCACTTGTAACGTGTGTGGGATGCTTTACTCTCCTACCAGCGCCGAAGACGAATCCCAACACCTCCTCTTCCACAACCAGTTCATCAGCGCCGTCAGATACGTGGGCTGGAAAAAAGAGAGGATCCTGGGAGAATATCCTGATGGCAAGATTATTCTTGTTCTCCCTGATGATCCGAAGTATGCATTGAAAAAGGTTGAGGAGATCAGAGAAATGGTGGATAATGATTTGGGCTTCCAGCAAGTCGAGAGCAAAGTCCCGTCACAGACCAAAACCTTCCTCTTCATTTCAAACGATAAGAAAGTTGCAGGCTGCCTTATAGCAGAGCACATACAAGAGGGCTACAGGGTTATTGAGGAGTCCGTGCTGGAGGGTTCAGAAGGAGAGAAGGTGATGTATGAGCGTCAGAGGGCCTGGTGCTGCTCTACTGTTCCCGAACCTGCGCTCTGTGGCATCAGCCGCATTTGGGTGTTCAGCATGATGAGACGGAGGGGCATCGCCTCACGCATGATTGAGTGCCTCAGgaaCAATTTCATCTATGGGTCACATCTAAGTAAAGATGAAATCGCCTTCTCTGACCCCACACCAGACGGCAAACTCTTTGCAACACATTACTGTGGAACCTCTCAGTTTTTGGTCTACAACTTTGTCAGCGGCAAACGCTCAACCTGACAGGATGAGGACAACAGAACAGAGCTGAGTTTTATAATGTTAACATTTGAGAAGAGAAATGGACTAACAAGACCTTATTTCACTCAACCAAACAATGCAAACATGATGCGAGAGAACACAAAAGAGAGAAACAGACACAGAACAACGGCTCTTTTTGTTAAGAGTATTCGTTTTTACAAAAATTGGCCTAGCTTCCTTACAGGATGCAAAGTTGGACACTTTCACGGCCAGTTTTTTAATGATTCATTATAACTGATGCATCCCTCGGAGAAAGACATCTGAAATGTTCTCTCAGGTTTAGGTTGCAGCCTATTTTAGGACTCACCGTTTAGTGGAAGCCATGTAGTCCAGTGCACAATTGCAGAATCGGTGTAAGTATTTCTTTCTAGAACACACAGGAAGAGCTTTTTTCTACTGTAAGCAATGCCTCGGTCGTGAGGCGACGACTTTTGAATCTCAGGTTGAAAAAAACATCATGAATTTGCCATCAAAATCTCCCTTTAACCCCCGCATCACGTCAGCTATTTTCAAAGAGAGCGTATTTTCCTGAATCGCTGTGTTGCCTGTGCATTTTGCAGAGGTTTACATGCATGACATTGACTTTGTTGGATGGCGAGTGATTTCGAAGAAGTCGCTGGTATTTGCACAACTCTGCCCGAATGAATCTGATTCATTTGTTTCTAAGACGCATTAAGTGTGATGATTTGAAACGATTGCCCGGTCATAGTATTCCATTTACGTTTTAATATCTTTTAGATtgattttatgtatgtatgtatgtattttgattgaattatattaatttacacaTGAAA
>TCONS_00046652
AGTCCAGAATGTCAGATCTCACAGTCCAGCAATGTAAGTCAGTTAAATGATGCTAGGCAAATATTAATCGCCATtaatcacatacaaaataaaaCTCTGGTGTTTGATGGCATTTTGTTTAACTCTTCCTGTGCTTTGCAGGAAGCGGGTCAGAAGGCGTTTGGTGCGGTCACTTGTAACGTGTGTGGGATGCTTTACTCTCCTACCAGCGCCGAAGACGAATCCCAACACCTCCTCTTCCACAACCAGTTCATCAGCGCCGTCAGATACGTGGGCTGGAAAAAAGAGAGGATCCTGGGAGAATATCCTGATGGCAAGATTATTCTTGTTCTCCCTGATGATCCGAAGTATGCATTGAAAAAGGTTGAGGAGATCAGAGAAATGGTGGATAATGATTTGGGCTTCCAGCAAGTCGAGAGCAAAGTCCCGTCACAGACCAAAACCTTCCTCTTCATTTCAAACGATAAGAAAGTTGCAGGCTGCCTTATAGCAGAGCACATACAAGAGGGCTACAGGGTTATTGAGGAGTCCGTGCTGGAGGGTTCAGAAGGAGAGAAGGTGATGTATGAGCGTCAGAGGGCCTGGTGCTGCTCTACTGTTCCCGAACCTGCGCTCTGTGGCATCAGCCGCATTTGGGTGTTCAGCATGATGAGACGGAGGGGCATCGCCTCACGCATGATTGAGTGCCTCAGgaaCAATTTCATCTATGGGTCACATCTAAGTAAAGATGAAATCGCCTTCTCTGACCCCACACCAGACGGCAAACTCTTTGCAACACATTACTGTGGAACCTCTCAGTTTTTGGTCTACAACTTTGTCAGCGGCAAACGCTCAACCTGA

Function

symbol description
esco1 Predicted to enable acyltransferase activity and metal ion binding activity. Predicted to be involved in post-translational protein acetylation; regulation of DNA replication; and sister chromatid cohesion. Predicted to be located in nucleus. Orthologous to human ESCO1 (establishment of sister chromatid cohesion N-acetyltransferase 1).

GO:

id name namespace
GO:0034421 post-translational protein acetylation biological_process
GO:0007062 sister chromatid cohesion biological_process
GO:0006275 regulation of DNA replication biological_process
GO:0000785 chromatin cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-130530-818 Predicted to enable acyltransferase activity and metal ion binding activity. Predicted to be involved in post-translational protein acetylation; regulation of DNA replication; and sister chromatid cohesion. Predicted to be located in nucleus. Orthologous to human ESCO1 (establishment of sister chromatid cohesion N-acetyltransferase 1).

Ensembl:

ensembl_id ENSDARG00000077057

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046651 False 3737 mRNA 0.46 10 36177388 36196077
TCONS_00046652 True 840 mRNA 0.48 7 36178203 36187094

Neighbor

gene id symbol gene type direction distance location
XLOC_023616 pak1ip1 coding downstream 2023 36158745 ~ 36175365 (-)
XLOC_023615 tmem14cb coding downstream 40987 36129216 ~ 36136401 (-)
XLOC_023614 CABZ01075509.1 coding downstream 81862 36090794 ~ 36095526 (-)
XLOC_023613 NA coding downstream 130196 36046699 ~ 36047192 (-)
XLOC_023612 NA coding downstream 162658 35998439 ~ 36014730 (-)
XLOC_023618 tmem241 coding upstream 30997 36227074 ~ 36230311 (-)
XLOC_023619 tmem241 coding upstream 35551 36231628 ~ 36238054 (-)
XLOC_023620 si:ch211-40k21.5 coding upstream 57178 36253255 ~ 36271381 (-)
XLOC_023621 NA coding upstream 79498 36275575 ~ 36427781 (-)
XLOC_023622 naglu coding upstream 107560 36303637 ~ 36316104 (-)
XLOC_023665 dre-mir-735 misc upstream 1981884 38177961 ~ 38178027 (-)
XLOC_023611 NA non-coding downstream 181138 35974819 ~ 35996250 (-)
XLOC_023610 NA non-coding downstream 254999 35878761 ~ 35922389 (-)
XLOC_023608 NA non-coding downstream 453012 35709567 ~ 35724376 (-)
XLOC_023624 NA non-coding upstream 168359 36364436 ~ 36366766 (-)
XLOC_023625 NA non-coding upstream 378016 36574093 ~ 36579467 (-)
XLOC_023628 NA non-coding upstream 493218 36689295 ~ 36699007 (-)
XLOC_023632 NA non-coding upstream 676798 36872875 ~ 36879127 (-)

Expression


Co-expression Network