ogfod2 (ogfod2)


Basic Information

Item Value
gene id ogfod2
gene name ogfod2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 37340705 ~ 37344084 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606369.2
GCCACATATTTAAATAATAGAGTACCGTTTGATATTTCTATATTTTATATACAGCAATGTGTCTCTGTTTGAGCTCTTTTGTTGGTTACAAATCATGGAAACTAAATGCTGAGAGTATCATTTCACATCGGACACATAACATAGTTGGATCACAACAAACAACTACAGTTCCGCGGGCGATATCCCCCCTGCTATATTAGCCAATATTATTATGAATTGTCCTATAATACGTTGATTTGTATTATCTTTATATGACAAGTCATGCAACACGTCAAGGATTCCAAGGCAACATTttacacttgtagttgttttagCACTGACAATATTTTCCTCGAGGAGTTCAAACTTCATGTCAGATTTCTATCCGAGCACCAGTTTAGATCTGATTATCAAGCGGTGTTAAGAAATCTTGGCTGCTCCACTGACACAGAATTCAAGGACATCCTGAAAAAGATTGAGAAAGAAGTTGAAAGGCGCAGGAGCCTTGGTGTGAAGTCAGCTGAGAGAGCTGCAGCCATTAAGGAGATTTATAAACCACTCCATGACCATGTCTACCTTCTCCATGAGTCCTATATGGCACCAGAGTTTAAACAGATGGTGGATTATTGTCGAAGTGATGAGGCCAGTAAAGAGGGACTGTTGAGTTTAATGCAGACAGAAGCAGCGGCAAGGGTCTTCCGCTTTCCTGTGTTCAAGAAAGTCTTCTGTGATGAGCTGATAGAAGAGATGGAACACTTTGAACAATCTAGATCGCCCAAGGGCAGACCGAATACCATGAATAACTATGGGATCCTCCTGAACGAGTTAGGGTTTGACGAAGGCTTCATCATCCCTCTCCGTGAGCAGTATCTGCAGCCTCTCACATCTCTGCTCTACCATGACTGTGGGGGATGTTACCTGGACAGCCACAAGGCCTTCATGGTGAAATATGACATGCATGAAGACTTGGACCTCAGCTACCACTATGACAATGCAGAGGTCACTCTCAACGTGTCTCTGGGGAAAGAGTTCACGGAGGGGAATCTCTACTTTGGTGACATGCGACAGGTGCCTCTGAGTGAGACAGCATGTACAGAGGTAGAGCACAAAGTGACGGAGGGTATCCTCCACAGAGGACAACACATGCACGGTGCCCTGCCCATCTCCTCTGGGCAGCGCTGGAACCTCATTGTCTGGATGAGAGCCTCACAGGAGAGGAACAAACTGTGCCCCATGTGCAACAAGATGCCCACCCTGGTCGAAGGAGAGGGTTTCGCAGACGGCTTCACGAGTGACATAGGGATGTCTCTTCTACAGAATGTATAATGTGTCCTGCATTAACTTAATGTTGCTGGTCCATCTGTATTTGTGTATGTTAGTGTAACTATTGTCTGGATGTTTACTTATCGTAGAGATTATCGCATGTGCCAAAGAAGAGTTGTGGAGAGGAAACGTGAGACATTATGAACATAGGGAGGCTCATCACTACTTCTTCAAAACACCTCACTACAAACTTCATTATGCAGTGTCACATTTATTCCTATATTTCCTAAAACATCATGTCCATACAAAAAATGTGTAGCTAGTGAATTGAATGGTATTTTGTACAGGTAGGGGTATTTCATATTCAAATGCCAGTGTTTATAGACAGTGGGGGAGAACCTGAGCTTTTGCCTTCCCCTTTATGGCTTACTTTTAGTGGCCTTGCTCCTGTTTCTTGTTCACAGAAAGTTGACAAGATTTTTAATCTGTACAATTTATAAATCATGTAAatatacggaacaaaaatataaacatgacatgtaaagtgtttgccccatgtttcatgagctgaaaagatcccagaaatgttccatatgcacaaaaagcttattactCAAGTTTTGTGCACAACATAtgttttcatccctgttagtgagcatttcttctttgccaagataatccatccacctgacaggtgtggcatatcaagaaggtgattaaacagcatgctcattgcacaggtgcaccttgtgctgggccaAAAATGTCTCaagatttgagggagtgtgcaattagcatgataactacaggaatgtccaccattgAATTGAATGCTAATTGCTCTACCATaggccgcctccaacgtcgttttagagaatttggcagtacatacaaccgcctcacaactgcagaccacatgcaaccacaccagcccaggacctccacatccagcttcttcacctgcgggattgtctgagaccagccacctggacagctgatgaaactgaggagtatttctgtgtaataaagcccttttgtggggaaaatctaattctgattggctgggcttggCTTCCAAGGGTTGGACCTACACCCTCCCAGACCCACCCATGagtgcacccctgcccagtcatgtgaaatccatagattaggggctaatgaatttatttgaattgactgatttccttctatgaactgtaactcagtaaaatagaaattgttgcatgttgtgtttaaatATTTTTTCAGTATAATAATAAATGCATAACTGTA
>XM_021606370.2
TGGCCACATATTTAAATAATAGAGTACCGTTTGATATTTCTATATTTTATATACAGCAATGTGTCTCTGTTTGAGCTCTTTTGTTGGTTACAAATCATGGAAACTAAATGCTGAGAGTATCATTTCACATCGGACACATAACATAGTTGGATCACAACAAACAACTACAGTTCCGCGGGCGATATCCCCCCTGCTATATTAGCCAATATTATTATGAATTGTCCTATAATACGTTGATTTGTATTATCTTTATATGACAAGTCATGCAACACGTCAAGGATTCCAAGGCAACATTttacacttgtagttgttttagCACTGACAATATTTTCCTCGAGGAGTTCAAACTTCATGTCAGATTTCTATCCGAGCACCAGTTTAGATCTGATTATCAAGCGGTGTTAAGAAATCTTGGCTGCTCCACTGACACAGAATTCAAGGACATCCTGAAAAAGGAGTCCTATATGGCACCAGAGTTTAAACAGATGGTGGATTATTGTCGAAGTGATGAGGCCAGTAAAGAGGGACTGTTGAGTTTAATGCAGACAGAAGCAGCGGCAAGGGTCTTCCGCTTTCCTGTGTTCAAGAAAGTCTTCTGTGATGAGCTGATAGAAGAGATGGAACACTTTGAACAATCTAGATCGCCCAAGGGCAGACCGAATACCATGAATAACTATGGGATCCTCCTGAACGAGTTAGGGTTTGACGAAGGCTTCATCATCCCTCTCCGTGAGCAGTATCTGCAGCCTCTCACATCTCTGCTCTACCATGACTGTGGGGGATGTTACCTGGACAGCCACAAGGCCTTCATGGTGAAATATGACATGCATGAAGACTTGGACCTCAGCTACCACTATGACAATGCAGAGGTCACTCTCAACGTGTCTCTGGGGAAAGAGTTCACGGAGGGGAATCTCTACTTTGGTGACATGCGACAGGTGCCTCTGAGTGAGACAGCATGTACAGAGGTAGAGCACAAAGTGACGGAGGGTATCCTCCACAGAGGACAACACATGCACGGTGCCCTGCCCATCTCCTCTGGGCAGCGCTGGAACCTCATTGTCTGGATGAGAGCCTCACAGGAGAGGAACAAACTGTGCCCCATGTGCAACAAGATGCCCACCCTGGTCGAAGGAGAGGGTTTCGCAGACGGCTTCACGAGTGACATAGGGATGTCTCTTCTACAGAATGTATAATGTGTCCTGCATTAACTTAATGTTGCTGGTCCATCTGTATTTGTGTATGTTAGTGTAACTATTGTCTGGATGTTTACTTATCGTAGAGATTATCGCATGTGCCAAAGAAGAGTTGTGGAGAGGAAACGTGAGACATTATGAACATAGGGAGGCTCATCACTACTTCTTCAAAACACCTCACTACAAACTTCATTATGCAGTGTCACATTTATTCCTATATTTCCTAAAACATCATGTCCATACAAAAAATGTGTAGCTAGTGAATTGAATGGTATTTTGTACAGGTAGGGGTATTTCATATTCAAATGCCAGTGTTTATAGACAGTGGGGGAGAACCTGAGCTTTTGCCTTCCCCTTTATGGCTTACTTTTAGTGGCCTTGCTCCTGTTTCTTGTTCACAGAAAGTTGACAAGATTTTTAATCTGTACAATTTATAAATCATGTAAatatacggaacaaaaatataaacatgacatgtaaagtgtttgccccatgtttcatgagctgaaaagatcccagaaatgttccatatgcacaaaaagcttattactCAAGTTTTGTGCACAACATAtgttttcatccctgttagtgagcatttcttctttgccaagataatccatccacctgacaggtgtggcatatcaagaaggtgattaaacagcatgctcattgcacaggtgcaccttgtgctgggccaAAAATGTCTCaagatttgagggagtgtgcaattagcatgataactacaggaatgtccaccattgAATTGAATGCTAATTGCTCTACCATaggccgcctccaacgtcgttttagagaatttggcagtacatacaaccgcctcacaactgcagaccacatgcaaccacaccagcccaggacctccacatccagcttcttcacctgcgggattgtctgagaccagccacctggacagctgatgaaactgaggagtatttctgtgtaataaagcccttttgtggggaaaatctaattctgattggctgggcttggCTTCCAAGGGTTGGACCTACACCCTCCCAGACCCACCCATGagtgcacccctgcccagtcatgtgaaatccatagattaggggctaatgaatttatttgaattgactgatttccttctatgaactgtaactcagtaaaatagaaattgttgcatgttgtgtttaaatATTTTTTCAGTATAATAATAAATGCATAACTGTA
>XM_021606371.2
GAAAAATGGCCACATATTTAAATAATAGAGTACCGTTTGATATTTCTATATTTTATATACAGCAATGTGTCTCTGTTTGAGCTCTTTTGTTGGTTACAAATCATGGAAACTAAATGCTGAGAGTATCATTTCACATCGGACACATAACATAGTTGGATCACAACAAACAACTACAGTTCCGCGGGCGATATCCCCCCTGCTATATTAGCCAATATTATTATGAATTGTCCTATAATACGTTGATTTGTATTATCTTTATATGACAAGTCATGCAACACGTCAAGGATTCCAAGGCAACATTttacacttgtagttgttttagCACTGACAATATTTTCCTCGAGGAGTTCAAACTTCATGTCAGATTTCTATCCGAGCACCAGTTTAGATCTGATTATCAAGCGGTGTTAAGAAATCTTGGCTGCTCCACTGACACAGAATTCAAGGACATCCTGAAAAAGATTGAGAAAGAAGTTGAAAGGCGCAGGAGCCTTGGTGTGAAGTCAGCTGAGAGAGCTGCAGCCATTAAGGAGATTTATAAACCACTCCATGACCATGTCTACCTTCTCCATGAGTCCTATATGGCACCAGAGTTTAAACAGATGGTGGATTATTGTCGAAGTGATGAGGCCAGTAAAGAGGGACTGTTGAGTTTAATGCAGACAGAAGCAGCGGCAAGGGTCTTCCGCTTTCCTGTGTTCAAGAAAGTCTTCTGTGATGAGCTGATAGAAGAGATGGAACACTTTGAACAATCTAGATCGCCCAAGGGCAGACCGAATACCATGAATAACTATGGGATCCTCCTGAACGAGTTAGGGTTTGACGAAGGCTTCATCATCCCTCTCCGTGAGCAGTATCTGCAGCCTCTCACATCTCTGCTCTACCATGACTGTGGGGGATGTTACCTGGACAGCCACAAGGCCTTCATGGTGCCTCTGAGTGAGACAGCATGTACAGAGGTAGAGCACAAAGTGACGGAGGGTATCCTCCACAGAGGACAACACATGCACGGTGCCCTGCCCATCTCCTCTGGGCAGCGCTGGAACCTCATTGTCTGGATGAGAGCCTCACAGGAGAGGAACAAACTGTGCCCCATGTGCAACAAGATGCCCACCCTGGTCGAAGGAGAGGGTTTCGCAGACGGCTTCACGAGTGACATAGGGATGTCTCTTCTACAGAATGTATAATGTGTCCTGCATTAACTTAATGTTGCTGGTCCATCTGTATTTGTGTATGTTAGTGTAACTATTGTCTGGATGTTTACTTATCGTAGAGATTATCGCATGTGCCAAAGAAGAGTTGTGGAGAGGAAACGTGAGACATTATGAACATAGGGAGGCTCATCACTACTTCTTCAAAACACCTCACTACAAACTTCATTATGCAGTGTCACATTTATTCCTATATTTCCTAAAACATCATGTCCATACAAAAAATGTGTAGCTAGTGAATTGAATGGTATTTTGTACAGGTAGGGGTATTTCATATTCAAATGCCAGTGTTTATAGACAGTGGGGGAGAACCTGAGCTTTTGCCTTCCCCTTTATGGCTTACTTTTAGTGGCCTTGCTCCTGTTTCTTGTTCACAGAAAGTTGACAAGATTTTTAATCTGTACAATTTATAAATCATGTAAatatacggaacaaaaatataaacatgacatgtaaagtgtttgccccatgtttcatgagctgaaaagatcccagaaatgttccatatgcacaaaaagcttattactCAAGTTTTGTGCACAACATAtgttttcatccctgttagtgagcatttcttctttgccaagataatccatccacctgacaggtgtggcatatcaagaaggtgattaaacagcatgctcattgcacaggtgcaccttgtgctgggccaAAAATGTCTCaagatttgagggagtgtgcaattagcatgataactacaggaatgtccaccattgAATTGAATGCTAATTGCTCTACCATaggccgcctccaacgtcgttttagagaatttggcagtacatacaaccgcctcacaactgcagaccacatgcaaccacaccagcccaggacctccacatccagcttcttcacctgcgggattgtctgagaccagccacctggacagctgatgaaactgaggagtatttctgtgtaataaagcccttttgtggggaaaatctaattctgattggctgggcttggCTTCCAAGGGTTGGACCTACACCCTCCCAGACCCACCCATGagtgcacccctgcccagtcatgtgaaatccatagattaggggctaatgaatttatttgaattgactgatttccttctatgaactgtaactcagtaaaatagaaattgttgcatgttgtgtttaaatATTTTTTCAGTATAATAATAAATGCATAACTGTA

Function

symbol description
ogfod2 Predicted to enable 2-oxoglutarate-dependent dioxygenase activity; L-ascorbic acid binding activity; and iron ion binding activity. Orthologous to human OGFOD2 (2-oxoglutarate and iron dependent oxygenase domain containing 2).

NR:

description
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X3

GO:

id name namespace
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0046872 metal ion binding molecular_function
GO:0051213 dioxygenase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606369.2 False 2514 mRNA 0.43 7 37340705 37344076
XM_021606370.2 False 2405 mRNA 0.43 6 37340705 37344078
XM_021606371.2 True 2396 mRNA 0.42 7 37340705 37344084

Neighbor

gene id symbol gene type direction distance location
LOC110525881 LOC106585120 coding downstream 147553 37160379 ~ 37193152 (-)
LOC110525880 casp3 coding downstream 237711 37097779 ~ 37102994 (-)
ncaph LOC106585119 coding downstream 262990 37068792 ~ 37077715 (-)
vamp8 LOC106585118 coding downstream 275675 37050701 ~ 37065030 (-)
vamp5 LOC106585117 coding downstream 293428 37037439 ~ 37047277 (-)
LOC110525887 LOC106585127 coding upstream 124674 37468758 ~ 37482116 (-)
zmat4a zmat4 coding upstream 284711 37628795 ~ 37778250 (-)
sfrp1a LOC106585130 coding upstream 480970 37825054 ~ 37842809 (-)
loxl2b LOC106585132 coding upstream 572346 37916430 ~ 37996902 (-)
hdr LOC106584955 coding upstream 667247 38011331 ~ 38018136 (-)
G503159 LOC106580514 non-coding downstream 8835 37331484 ~ 37336552 (-)
G503114 NA non-coding downstream 73326 37267167 ~ 37267379 (-)
G503113 NA non-coding downstream 76328 37264167 ~ 37264377 (-)
G503112 NA non-coding downstream 77578 37262821 ~ 37263127 (-)
G503110 NA non-coding downstream 79817 37260529 ~ 37260888 (-)
G503178 NA non-coding upstream 16947 37361031 ~ 37362059 (-)
G503195 NA non-coding upstream 42817 37386901 ~ 37387101 (-)
G503239 NA non-coding upstream 90610 37434694 ~ 37538914 (-)
G503311 NA non-coding upstream 198780 37542864 ~ 37543074 (-)
G503316 NA non-coding upstream 204572 37548656 ~ 37548926 (-)
G503064 NA other downstream 99768 37239844 ~ 37240937 (-)
hk2 LOC106585103 other downstream 823437 36507843 ~ 36569143 (-)
G501142 NA other downstream 1572776 35765366 ~ 35767929 (-)
nsmfb nsmf other upstream 1610786 38926899 ~ 38967540 (-)
G505472 NA other upstream 1861794 39205878 ~ 39206269 (-)
G505493 ptch1 other upstream 1888609 39232693 ~ 39233210 (-)
aopep cssa24h9orf3 other upstream 2077584 39313471 ~ 39434971 (-)
G506641 NA other upstream 2279601 39623685 ~ 39624344 (-)

Expression


Co-expression Network