G513974


Basic Information

Item Value
gene id G513974
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 46192330 ~ 46192880 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU583063
acagcaaaggaccttgtgaagattctggaggaaacaggtacaaatagccacagtaaaacgagtcctatatcgacataacctgaaaggccgctcagcaaggaataagccactgctccaaaaccaccataaaaaagccagactacggtttgcaactgcacatggggacaaagatggtacattttggagaaatgtcctctggtctgatgaaacaaaaatagaactgtttggccataatgaccatcgttatgtttgggaatgtgatgaaagaaataaaagctgaaataaatcattctctctacttttattctgacatttcacattcttaaaataaagtggtgatcctaactgacctaagacaggaaatttttacttggattaaatgtcaggaattgtgaaaaactgagtttaaatgtattaggctaaggtgtatggaaacttcaactgtgtatatatatatatatatatatacagtgccttgcaaaagtattcggcccccttgaactttgcaaccttttgccacatttcaggcttcaaacataaagatataaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU583063 True 551 lncRNA 0.37 1 46192330 46192880

Neighbor

gene id symbol gene type direction distance location
LOC110526039 NA coding downstream 196944 45973773 ~ 45995386 (-)
LOC110526038 LOC106584879 coding downstream 237579 45915772 ~ 45954751 (-)
LOC100136024 LOC100136024 coding downstream 285171 45904051 ~ 45907159 (-)
LOC110526037 LOC106584895 coding downstream 329089 45851230 ~ 45863241 (-)
LOC118965028 NA coding downstream 417402 45765669 ~ 45774928 (-)
apba1a apba1 coding upstream 70241 46263121 ~ 46360886 (-)
LOC110526044 LOC107699739 coding upstream 174821 46367701 ~ 46430607 (-)
rnf215 rnf215 coding upstream 268483 46461363 ~ 46471132 (-)
LOC110526055 samd3 coding upstream 783515 46971364 ~ 46980777 (-)
utp15 utp15 coding upstream 852613 47045493 ~ 47056805 (-)
G513973 NA non-coding downstream 144 46191965 ~ 46192186 (-)
G513972 NA non-coding downstream 558 46191446 ~ 46191772 (-)
G513960 NA non-coding downstream 7643 46184418 ~ 46184687 (-)
G513955 LOC103911473 non-coding downstream 11738 46179282 ~ 46180592 (-)
G513952 NA non-coding downstream 15669 46176384 ~ 46176661 (-)
G513975 NA non-coding upstream 132 46193012 ~ 46193363 (-)
G514111 NA non-coding upstream 247684 46440564 ~ 46440942 (-)
G514113 NA non-coding upstream 249783 46442663 ~ 46442863 (-)
G514134 NA non-coding upstream 294286 46487166 ~ 46549791 (-)
G514085 NA non-coding upstream 317167 46510047 ~ 46512128 (-)
znrf3 LOC106584905 other downstream 915943 45270568 ~ 45384850 (-)
nf2a nf2 other downstream 1980507 44209338 ~ 44272386 (-)
prodhb LOC100194675 other downstream 2243941 43940790 ~ 43955257 (-)
G510310 NA other downstream 2668222 43523714 ~ 43524108 (-)
G509952 NA other downstream 3066943 43124581 ~ 43125387 (-)
G514434 NA other upstream 717778 46910658 ~ 46910950 (-)
G514777 NA other upstream 823282 47016162 ~ 47016496 (-)
G515094 LOC106585477 other upstream 1781913 47974793 ~ 47976975 (-)

Expression


Co-expression Network