G514134


Basic Information

Item Value
gene id G514134
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 46487166 ~ 46549791 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU583235
gctcgttctgtgcgtgatttcctgcaagacaggaatgtcagagttctgccatggccagcgaagagcccagatctcaatcccattgagcacgtctgtgatctgttggatcggagggtgagggctagggccattccccccagaaatgtctgggaacttgcagGTGCCTTGGAGGAAGAGTGGGggaacatctcacagcaagaactggcaaatctggtgcagtccacaaggaggagatgcactgcagtaattaatgcagctggtggccacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU583235 True 269 lncRNA 0.54 2 46487166 46549791

Neighbor

gene id symbol gene type direction distance location
rnf215 rnf215 coding downstream 16034 46461363 ~ 46471132 (-)
LOC110526044 LOC107699739 coding downstream 56559 46367701 ~ 46430607 (-)
apba1a apba1 coding downstream 127184 46263121 ~ 46360886 (-)
LOC110526039 NA coding downstream 491780 45973773 ~ 45995386 (-)
LOC110526038 LOC106584879 coding downstream 532415 45915772 ~ 45954751 (-)
LOC110526055 samd3 coding upstream 426604 46971364 ~ 46980777 (-)
utp15 utp15 coding upstream 495702 47045493 ~ 47056805 (-)
LOC118965029 NA coding upstream 797043 47346834 ~ 47349012 (-)
LOC118965030 NA coding upstream 801920 47351711 ~ 47353889 (-)
LOC118964878 LOC106585477 coding upstream 957372 47507163 ~ 47511010 (-)
G514113 NA non-coding downstream 44303 46442663 ~ 46442863 (-)
G514111 NA non-coding downstream 46224 46440564 ~ 46440942 (-)
G513975 NA non-coding downstream 293803 46193012 ~ 46193363 (-)
G513974 NA non-coding downstream 294286 46192330 ~ 46192880 (-)
G513973 NA non-coding downstream 294980 46191965 ~ 46192186 (-)
G514184 NA non-coding upstream 23450 46573241 ~ 46574236 (-)
G514363 NA non-coding upstream 251786 46801577 ~ 46801846 (-)
G514424 NA non-coding upstream 351753 46901544 ~ 46903583 (-)
G514430 NA non-coding upstream 359585 46909376 ~ 46909721 (-)
G514435 NA non-coding upstream 361345 46911136 ~ 46911475 (-)
znrf3 LOC106584905 other downstream 1210779 45270568 ~ 45384850 (-)
nf2a nf2 other downstream 2275343 44209338 ~ 44272386 (-)
prodhb LOC100194675 other downstream 2538777 43940790 ~ 43955257 (-)
G514434 NA other upstream 360867 46910658 ~ 46910950 (-)
G514777 NA other upstream 466371 47016162 ~ 47016496 (-)
G515094 LOC106585477 other upstream 1425002 47974793 ~ 47976975 (-)
G515122 LOC106585477 other upstream 1714202 48263993 ~ 48264977 (-)
LOC110512142 LOC106585477 other upstream 1743055 48292846 ~ 48318495 (-)

Expression


Co-expression Network