G515145


Basic Information

Item Value
gene id G515145
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 48325461 ~ 48326114 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU584357
gtctactagtatcggactgtctctccacaacaacgccggattcctgccgtaatccctggaccactacttctgatcttcacagctagatcACAGCTTGCAGCTAACtagctcacagctagcttgcactcaTCGTGGcatccagtaccgaagctatccctaaggcccacctcccggcctacccGGCCTACTAAGCTGGACTGCCATTCAGTCCAGTAACAGACTGAGATTCCCTCTACTGATGGACATTGCATAGGTAAGGATGTTTAAGAGCTCTGCTATAGCTTGTAGTTTTGCtttaggtgtgtgttagaaacataggtatgcctaccaaactcatagcacttgttatttttcaacgttactattctgcatctctctctcccccccagttggagaggtttctccctccatatctcagtctgtcaaaaaacgatccttgattgtcagggtcttttcagcaatgatgaagccatttaggcgcttcaccaagaagaacctgttacgctgcatgaagaactacttatgtaacagcaagacttttgacaagaggaatttctgcatgtctaccctttcaaagtctatttgatcaaataaatgccattgattttacaagaatttcaagtgttttggaagattgataatactgaagcagat

Function

NR:

description
uncharacterized protein LOC110525583

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU584357 True 654 lncRNA 0.44 1 48325461 48326114

Neighbor

gene id symbol gene type direction distance location
LOC110512142 LOC106585477 coding downstream 6966 48292846 ~ 48318495 (-)
LOC118965031 LOC106585477 coding downstream 307607 48016304 ~ 48017854 (-)
LOC110511762 NA coding downstream 339810 47943033 ~ 47985651 (-)
LOC110513487 LOC106585477 coding downstream 349813 47948315 ~ 47975648 (-)
LOC118964890 NA coding downstream 391144 47933538 ~ 47934317 (-)
LOC118965032 LOC106585477 coding upstream 20750 48346864 ~ 48348019 (-)
LOC118964894 NA coding upstream 22595 48348709 ~ 48353264 (-)
LOC118964892 LOC106585477 coding upstream 52271 48375946 ~ 48387076 (-)
rab14 LOC106587009 coding upstream 209571 48535685 ~ 48540886 (-)
c5 c5 coding upstream 225506 48551620 ~ 48625435 (-)
G515144 NA non-coding downstream 572 48324552 ~ 48324889 (-)
G515141 NA non-coding downstream 4001 48321053 ~ 48321460 (-)
G515128 LOC106585477 non-coding downstream 34775 48290169 ~ 48290686 (-)
G515121 NA non-coding downstream 39083 48258331 ~ 48286378 (-)
G515123 NA non-coding downstream 59353 48265170 ~ 48266108 (-)
G515507 cntrl non-coding upstream 87188 48413302 ~ 48420975 (-)
G515583 cntrl non-coding upstream 162560 48488674 ~ 48490587 (-)
G515633 NA non-coding upstream 284328 48610442 ~ 48616313 (-)
G515703 NA non-coding upstream 426265 48752379 ~ 48766984 (-)
G515772 NA non-coding upstream 545877 48871991 ~ 48872300 (-)
G515139 LOC106585477 other downstream 4873 48319747 ~ 48320588 (-)
G515122 LOC106585477 other downstream 60484 48263993 ~ 48264977 (-)
G515094 LOC106585477 other downstream 348486 47974793 ~ 47976975 (-)
G514777 NA other downstream 1308965 47016162 ~ 47016496 (-)
prdm12b LOC106587007 other upstream 300924 48625747 ~ 48630388 (-)
LOC110512258 LOC106585521 other upstream 990930 49316279 ~ 49320412 (-)
LOC110512256 LOC106585521 other upstream 1021356 49346858 ~ 49349193 (-)
LOC118936342 LOC106585521 other upstream 1053708 49379716 ~ 49385907 (-)

Expression


Co-expression Network