XLOC_024952 (FP325358.1)



Basic Information


Item Value
gene id XLOC_024952
gene name FP325358.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 1260360 ~ 1268825 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00049499
TCTTCAGTTTTATTCTCAAAagacttataaaataaaatacatgacaGCCCTTGATGTGAGGGATATTTCTGCCGTTGATGCATTTGAGCACTTGATTGTACTGAAGCAGCGTGAGCCATACTGTATTGCTGGGAAGGAGAAAACGAACCAGCTGCACTGCTATTACTCCCCACGACTGCAGAGCCACAGTCCATGGAGTAGGGAGAAATCATTCCGGAGGAAGACCCTGAACCGGAGAGGTGTTGGTACTGGTGCCCATCCACGTTTGTGTACCTAAATCCGGCTCCGTAAGCGGCTCCACCTCTTCGGCTTCGGTCTCGCCCACTCACAGAGAAGTAATAATCCATACTGTCCTTTCGGTAGGAGTTCCCCCCCGCGCTGCTCTGCGGCATCTCTGTGACCGCTCGCCTGGAGCTGTAGCCATGTACCGGAGCATGcaggtgctgctgctgctgggccCGCAGGTGCAAGTGCTGCCCGTGGCTCTGTAGGCTGGTCTGGGCCTGCTGAAGGGACACATAGTCCTCGGAGGTCCTGGGGGAGATCTGAAGGTCTGACGGGTGGGTCTGATATGGGGAACTGACTACGCCTGCTCCACGGCTGAACCCTGGGTGGA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095882

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00049499 True 616 lncRNA 0.55 2 1260360 1268825

Neighbor


gene id symbol gene type direction distance location
XLOC_024951 NA coding upstream 23643 1235024 ~ 1236717 (+)
XLOC_024950 wbp2nl coding upstream 32230 1223824 ~ 1228130 (+)
XLOC_024949 rrp7a coding upstream 38111 1219344 ~ 1222249 (+)
XLOC_024948 poldip3 coding upstream 42133 1209006 ~ 1218227 (+)
XLOC_024947 CU672266.2 coding upstream 69018 1187244 ~ 1191342 (+)
XLOC_024953 sox10 coding downstream 223349 1492174 ~ 1501255 (+)
XLOC_024954 CR394546.3 coding downstream 285477 1554302 ~ 1682090 (+)
XLOC_024955 CR394546.1 coding downstream 304025 1572850 ~ 1597978 (+)
XLOC_024956 CR394546.5 coding downstream 320739 1589564 ~ 1590504 (+)
XLOC_024957 NA coding downstream 361752 1630577 ~ 1631804 (+)
XLOC_025429 BX649540.1 misc downstream 28979914 30248739 ~ 30249036 (+)
XLOC_024943 NA non-coding upstream 124620 1132938 ~ 1135740 (+)
XLOC_024941 NA non-coding upstream 154047 1096804 ~ 1106313 (+)
XLOC_024936 NA non-coding upstream 272305 986881 ~ 988055 (+)
XLOC_024958 NA non-coding downstream 362987 1631812 ~ 1633218 (+)

Expression



Co-expression Network