XLOC_025150 (si:ch211-108d22.1)


Basic Information

Item Value
gene id XLOC_025150
gene name si:ch211-108d22.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 14259115 ~ 14260797 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049685
TTTTGAGCGCAGGTAAACAGTATTATGGCAGAGTCGTCAATTTTTTACTCGCTGTTTGCGAGTAAAAAATTATGGTCAACGATGTGCAAATGATTGTCCGGATGTGCACTACAACACCGCAGAGCAAACTTGAGAAAGGTTTCAAGTTTTATGCATCTTCCTACCTGTGCAATTATGAAGGTAACATTATGAGATTCAGAGCTAGAAATTTTTGTGTGTTACTCCATCCTGGAGCGGACATCCGTCAGAAGATCCATGCCATCGTCTGCTAGTTAATAGCTTCTGCTCGTGTGTGGCTGAGAGtgggatatgcaaacatttggttgctttgcttttccagacagcccattactctgaaatgtgtaatgtgtgttgtcACATGAACAATTGTTTGGAATGGATCAATAATGTGTTAAGTTCCATGAAACAGatgggtgtttatttatttatttaataagtatCAGCCCAAATACCTCTCTATGCACAAGTTAAAGAAGAAGCACCTGATTCAAGAAAACAACTGATTCAATGTCATTGTTTCTGTTCATCTGaatcaaatattttttcaaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097099

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049685 True 571 mRNA 0.38 2 14259115 14260797

Neighbor

gene id symbol gene type direction distance location
XLOC_025149 NA coding upstream 4350 14251244 ~ 14254765 (+)
XLOC_025148 AL954138.2 coding upstream 10577 14242119 ~ 14248538 (+)
XLOC_025147 NA coding upstream 56596 14201043 ~ 14202519 (+)
XLOC_025146 si:ch211-108d22.2 coding upstream 70093 14157090 ~ 14189022 (+)
XLOC_025145 NA coding upstream 185345 14028243 ~ 14073770 (+)
XLOC_025151 NA coding downstream 16853 14277650 ~ 14287841 (+)
XLOC_025152 plppr2a coding downstream 57005 14317802 ~ 14373165 (+)
XLOC_025153 tlcd4b coding downstream 127213 14388010 ~ 14452325 (+)
XLOC_025154 CU639471.1 coding downstream 138428 14399225 ~ 14399652 (+)
XLOC_025155 cnn1b coding downstream 203144 14463941 ~ 14486959 (+)
XLOC_025429 BX649540.1 misc downstream 15987942 30248739 ~ 30249036 (+)
XLOC_025134 NA non-coding upstream 781242 13476872 ~ 13477873 (+)
XLOC_025164 NA non-coding downstream 969155 15229952 ~ 15231838 (+)
XLOC_025169 NA non-coding downstream 1244387 15505184 ~ 15506157 (+)
XLOC_025170 NA non-coding downstream 1256755 15517552 ~ 15517899 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000526_00017443_00019779 NA coding CI01000526 null 17443 ~ 19968 (+)