XLOC_025241 (BX322663.3)



Basic Information


Item Value
gene id XLOC_025241
gene name BX322663.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 19312991 ~ 19313107 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00049850
AGCCACAGCCATATTACCCTGCAGCCCATAAcctgttactcactgaagctaagcagggctgagcctggtcagtacctagatgtgagaccacatggaaaagctatgttgctgttggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000106019

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00049850 True 117 rRNA 0.50 1 19312991 19313107

Neighbor


gene id symbol gene type direction distance location
XLOC_025239 smarca4a coding upstream 30466 19245804 ~ 19282525 (+)
XLOC_025238 il12rb2l coding upstream 74597 19216567 ~ 19238394 (+)
XLOC_025237 rln3a coding upstream 102354 19207176 ~ 19210637 (+)
XLOC_025236 si:ch211-198m1.1 coding upstream 345338 18936006 ~ 18967653 (+)
XLOC_025235 CU151886.1 coding upstream 395408 18917461 ~ 18917583 (+)
XLOC_025242 kri1 coding downstream 23179 19336286 ~ 19355200 (+)
XLOC_025243 BX322663.1 coding downstream 36612 19349719 ~ 19349817 (+)
XLOC_025244 spc24 coding downstream 42762 19355869 ~ 19363981 (+)
XLOC_025245 zgc:123297 coding downstream 133890 19446997 ~ 19457773 (+)
XLOC_025246 pde6ga coding downstream 147884 19460991 ~ 19466015 (+)
XLOC_025429 BX649540.1 misc downstream 10935632 30248739 ~ 30249036 (+)
XLOC_025234 CU151886.2 non-coding upstream 420225 18892650 ~ 18892766 (+)
XLOC_025233 AL772362.1 non-coding upstream 445039 18867835 ~ 18867952 (+)
XLOC_025229 AL772362.2 non-coding upstream 524506 18771528 ~ 18788485 (+)
XLOC_025227 NA non-coding upstream 640700 18670824 ~ 18672291 (+)
XLOC_025248 NA non-coding downstream 159856 19472963 ~ 19473197 (+)
XLOC_025257 NA non-coding downstream 746571 20059678 ~ 20064732 (+)
XLOC_025259 NA non-coding downstream 885195 20198302 ~ 20198619 (+)
XLOC_025261 NA non-coding downstream 1178095 20491202 ~ 20509513 (+)
XLOC_025232 tmem104 coding upstream 389076 18840810 ~ 18923915 (+)

Expression



Co-expression Network