XLOC_025229 (AL772362.2)


Basic Information

Item Value
gene id XLOC_025229
gene name AL772362.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 18771528 ~ 18788485 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049829
ATGATGTCAGTTCTGCTGTTGTGTCCACGGGCTGCTAAAACAATTGCGTCACGTATATATTTTAGATTAATTATCTGTTATTCGTTTAAAGAAAAGTGACCCCTGCTGCCTTCAAAGCCCTCCAAGCAGTCGAAGAAACTCTTTTAAAGTGGCACGGTCGACTATGGCAGCCTCTTTTGTTTCTTCATCGATGAGGAGGTACATGTAGTTGTCGGTGAGAGCGGGCAGCAGTTCCACCTTCATGTCGGACTGTTCCACCAGAGAGGATTTCCGAATCGCGGAGTGAAACAAGGCTGTGGGGGCTTCAAAACAAAGACACAGGTTCAGTGCATGTTCATGACCAacaatttcactttttttgtggaAAACGTCCATGTAGTTTACAATAACTATGGTTTAAACCAGAGATAGagcccgcaggccaaagttggtcCATGGTAACCTttcatttggcccaccatcccatctaagaagagagagagagagtgatggggatggtttagagactgtcatttctaatttaatgtaactacttgtttgtttgtttgtttctttgtttgtttgtttgtttttataactaAGCAACAAAAGTGAatgcaaataaaatgtttcaattaaacaaatcagaattgtttttttaaatgtacatactgtcacccaaCAGATAGAGAACAATCCAGAGAGATATCAGTAAACAAATGAAGGCAAAGGCAGATaatgcttgactagtgtattgaGCACTGAACTCCATTGtgctataaatgtgattgttttattgcaataggttataataaaatgtatatactgcATAAGCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097552

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049829 True 815 lncRNA 0.39 2 18771528 18788485

Neighbor

gene id symbol gene type direction distance location
XLOC_025228 narfl coding upstream 1577 18756231 ~ 18769951 (+)
XLOC_025227 NA coding upstream 99237 18670824 ~ 18672291 (+)
XLOC_025226 arhgap17b coding upstream 120888 18579806 ~ 18650640 (+)
XLOC_025225 cbx8a coding upstream 200413 18567560 ~ 18571115 (+)
XLOC_025224 cbx4 coding upstream 207498 18555899 ~ 18564030 (+)
XLOC_025230 fahd1 coding downstream 7085 18795570 ~ 18796559 (+)
XLOC_025231 tnpo2 coding downstream 18521 18807006 ~ 18839529 (+)
XLOC_025232 tmem104 coding downstream 52325 18840810 ~ 18923915 (+)
XLOC_025233 AL772362.1 coding downstream 79350 18867835 ~ 18867952 (+)
XLOC_025234 CU151886.2 coding downstream 104165 18892650 ~ 18892766 (+)
XLOC_025429 BX649540.1 misc downstream 11460254 30248739 ~ 30249036 (+)
XLOC_025218 NA non-coding upstream 574402 18189609 ~ 18197126 (+)
XLOC_025215 NA non-coding upstream 709745 18040613 ~ 18061783 (+)
XLOC_025203 CU207238.1 non-coding upstream 1309643 17395239 ~ 17461885 (+)
XLOC_025197 BX470185.1 non-coding upstream 1888224 16874401 ~ 16883304 (+)
XLOC_025235 CU151886.1 non-coding downstream 128976 18917461 ~ 18917583 (+)
XLOC_025241 BX322663.3 non-coding downstream 524506 19312991 ~ 19313107 (+)
XLOC_025243 BX322663.1 non-coding downstream 561234 19349719 ~ 19349817 (+)

Expression


Co-expression Network