XLOC_025203 (CU207238.1)


Basic Information

Item Value
gene id XLOC_025203
gene name CU207238.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 17395239 ~ 17461885 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049766
GGCTTCagcagaatgtgtgtgtgcacgcaatCACCAGAACTAGGAGCATGTGTGTGtaagtggtgcatgactggatcttgtagtccatgaaactgcagatttgtagtcctttgGCGATCCGTAGCctctagatcgctggtgatcataattattatattatattatattatattatattatattatattatattatattatattatattatattatattatattatattatattatattatattatattatattatattatatgaatagtgtacacaataaacaaattatttgttaatttaaaatattattattattattattattattattattattattattattattgttattattattattatttgtttattatttatttattt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095646

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049766 True 387 processed_transcript 0.21 2 17395239 17461885

Neighbor

gene id symbol gene type direction distance location
XLOC_025201 stat5a coding upstream 63320 17251542 ~ 17331919 (+)
XLOC_025200 stat3 coding upstream 287794 17030665 ~ 17107445 (+)
XLOC_025199 cavin1a coding upstream 382899 16976095 ~ 17012340 (+)
XLOC_025198 atp6v0a1a coding upstream 422114 16922226 ~ 16973125 (+)
XLOC_025197 BX470185.1 coding upstream 511935 16874401 ~ 16883304 (+)
XLOC_025204 hcrt coding downstream 75467 17537352 ~ 17541448 (+)
XLOC_025205 kcnh4a coding downstream 85647 17547532 ~ 17604109 (+)
XLOC_025206 rab5c coding downstream 153714 17615599 ~ 17651899 (+)
XLOC_025207 kat2a coding downstream 191899 17653784 ~ 17680114 (+)
XLOC_025208 dhx58 coding downstream 227534 17689419 ~ 17710221 (+)
XLOC_025429 BX649540.1 misc downstream 12786854 30248739 ~ 30249036 (+)
XLOC_025188 CR388224.1 non-coding upstream 1022112 16373012 ~ 16373127 (+)
XLOC_025185 NA non-coding upstream 1153899 16186593 ~ 16241340 (+)
XLOC_025184 NA non-coding upstream 1233780 16153224 ~ 16161459 (+)
XLOC_025183 CR387933.1 non-coding upstream 1339507 16055009 ~ 16055732 (+)
XLOC_025215 NA non-coding downstream 578728 18040613 ~ 18061783 (+)
XLOC_025218 NA non-coding downstream 727724 18189609 ~ 18197126 (+)
XLOC_025227 NA non-coding downstream 1208939 18670824 ~ 18672291 (+)
XLOC_025229 AL772362.2 non-coding downstream 1309643 18771528 ~ 18788485 (+)
XLOC_025233 AL772362.1 non-coding downstream 1405950 18867835 ~ 18867952 (+)

Expression


Co-expression Network