XLOC_025185


Basic Information

Item Value
gene id XLOC_025185
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 16186593 ~ 16241340 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052631
atatgttttttttttacatttaaagtaaacaatgtaaacattgtcaCAAATTCTGCtaactaaacagaaatatttctaaaaaatctTGAAAAGCAAGAATGTAAAATCCTCCTACTTTGACTAACAGCTCATAAACAGATTAGGAAAATGACAGAACATGACAGTTCAGTTAATTTGACAGAAGATCTCAATTTAAAGGCAATGCAAAGACATAAGAAAGCAAGGACAATGCAAGCTCATGAGCTAATATGATGCATGTAAGATGCTCACAAATATATACCATTGCATTAGGATTATTGAATACATTAATGCACACTAAGATGCACATTGTAAAAATGGCAAATGTTTGATTTTACTTGAACTACTGGAACAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052631 True 373 lncRNA 0.30 2 16186593 16241340

Neighbor

gene id symbol gene type direction distance location
XLOC_025184 NA coding upstream 25134 16153224 ~ 16161459 (+)
XLOC_025183 CR387933.1 coding upstream 130861 16055009 ~ 16055732 (+)
XLOC_025182 mapk8ip3 coding upstream 197865 15907297 ~ 15988728 (+)
XLOC_025181 jpt2 coding upstream 284364 15893039 ~ 15902229 (+)
XLOC_025180 NA coding upstream 320191 15865921 ~ 15866402 (+)
XLOC_025187 st8sia6 coding downstream 24584 16265924 ~ 16285259 (+)
XLOC_025188 CR388224.1 coding downstream 131672 16373012 ~ 16373127 (+)
XLOC_025189 kcnj12b coding downstream 208150 16449490 ~ 16458018 (+)
XLOC_025190 slc6a16a coding downstream 325021 16566361 ~ 16591648 (+)
XLOC_025191 slc17a7a coding downstream 371234 16612574 ~ 16654088 (+)
XLOC_025429 BX649540.1 misc downstream 14007399 30248739 ~ 30249036 (+)
XLOC_025176 BX914211.1 non-coding upstream 391197 15755723 ~ 15795396 (+)
XLOC_025174 NA non-coding upstream 466770 15685362 ~ 15719823 (+)
XLOC_025197 BX470185.1 non-coding downstream 633061 16874401 ~ 16883304 (+)
XLOC_025203 CU207238.1 non-coding downstream 1153899 17395239 ~ 17461885 (+)
XLOC_025215 NA non-coding downstream 1799273 18040613 ~ 18061783 (+)
XLOC_025218 NA non-coding downstream 1948269 18189609 ~ 18197126 (+)

Expression


Co-expression Network