XLOC_025581


Basic Information

Item Value
gene id XLOC_025581
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 37595341 ~ 37596530 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052356
GTGTGCGTACATATTTAACACAGTTTTATTTTTCCTAATAGATCACAAAGAAACTTGCAGGTGCTGCTGCGGGAGCAGCTGCCTGGTGCACTAATGTGGGGAACGAACACGGTCAAGTCCTTGTCTCTGTGCTGTCAGCTGCCGAGGGTCATGGACTGGACCCAATGGCGGCCGGGCTGATGAAGCGTTACCGGGAGGCAGGAGAGGCAGCCCCGAAAGTAATGTACGTGGACAGAGATTGCTGCAGTCAGCACGGCCAGTCTCCGGTGAAGATCATGTTTCGGGAGTGGGATGAGCTTGAAGTGCGCCTTGACATCTGGCATTTTATGCGCCGGTTTGCTGCAGGTGTCACGACAGAAGCTCATCCGCTCTACGGGATCTTCATGGCACGTCTGTCCACGTGCATCTTTCAGTGGGATCCAGAAGATGTGGCCGCTCTTCGCCAGGCAAAGGAAGGTGAGCTGGCGGCAAAAAAGACTGGCCACATTTCACAAACGGCTCTCAGTGCTCGCATAAACCGGAGGGAGCTAGCACTGCACTGCCGTAGGAGGACCAGAGGTGTGGAGGAGACCACCTGTCTGATTGGAAAGCTGTTGGACCATTTTGACAGCGAGCATGGGAAGGACACTCTGGGTGTTCCTCTGCTGGACCACGAACGGATCCAGCAGATATGGAAGGAACAGCAGAAGCATATACAGTGCATTCAAGACCCAGAGAACTTTCCACTGTACATGAAGACAGGGACACTGAAGAAAGGCGGTGTGGAGCTGTGTTGTTACAGGTGTGCCCGTGGCTCTACATCTTTGGAGTCCTTCCACCTCCACCTAAACCGTTTTATTCCAGGGACCAGTGCCAGTGATGCGCATTTTCAGGCCTATCTCCTTGAGGGCTTGATGCGCTGGAATGATGACCGGATGGAAAGCACCATAAAAGGAGCATCCTCCATACGGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052356 True 951 lncRNA 0.53 2 37595341 37596530

Neighbor

gene id symbol gene type direction distance location
XLOC_025580 wnt9b coding upstream 13721 37574885 ~ 37581620 (+)
XLOC_025579 NA coding upstream 117908 37475789 ~ 37477433 (+)
XLOC_025578 fmnl1a coding upstream 360041 37196258 ~ 37235300 (+)
XLOC_025577 psmc3ip coding upstream 459772 37112693 ~ 37135569 (+)
XLOC_025576 retreg3 coding upstream 487468 37083765 ~ 37107873 (+)
XLOC_025582 NA coding downstream 199 37596729 ~ 37627885 (+)
XLOC_025583 NA coding downstream 2737 37599267 ~ 37616357 (+)
XLOC_025584 gosr2 coding downstream 52906 37649436 ~ 37660860 (+)
XLOC_025585 map3k14a coding downstream 110902 37707432 ~ 37742595 (+)
XLOC_025586 NA coding downstream 154606 37751136 ~ 37754962 (+)
XLOC_025429 BX649540.1 misc upstream 7346305 30248739 ~ 30249036 (+)
XLOC_025574 NA non-coding upstream 659206 36895432 ~ 36936135 (+)
XLOC_025572 NA non-coding upstream 745505 36835187 ~ 36849836 (+)
XLOC_025566 NA non-coding upstream 1169508 36424002 ~ 36425833 (+)
XLOC_025559 NA non-coding upstream 1477594 36115306 ~ 36117747 (+)
XLOC_025588 CR388062.3 non-coding downstream 191288 37787818 ~ 37787902 (+)
XLOC_025589 CR388062.2 non-coding downstream 191673 37788203 ~ 37788289 (+)

Expression


Co-expression Network