XLOC_025669 (gpr146)


Basic Information

Item Value
gene id XLOC_025669
gene name gpr146
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 45687266 ~ 45717575 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050529
TCCAACGGCGAAAGTTTGGCTCATGAATATAAATGAACAGTGTTTGCCGTAGTAGGATTTGATAATTTTTGCAGTCGGGTCTTTTGAAGAGGACTGTGGGGGAGGGTCACGTGACGTGTGTACACACACTGTAGAGTTCAGCACCACTCGACTCGTAGTAAGATCATCAGCGTCCTCCCCTTTCCAGAACAAGCGTTGACGGACCAGAGACGAATTTACCATATGCAACTGTGTTTACGCCACATCTCGGCGCCTTGATCGATCGCattttacttactttcttttacACGCAGTCCGGGTACTTCTGCTGCCGTTTTAGGAGCTTTTGGCAAAGTATCCGAGGAGAAATGTCAATGGAAATACAGCAGAACCCGATGCCTCCGTAGAGCTGTCCGAGTGCCAAGAACTGGTCCTCTGCTGATTCAGAAAGACAGAGCAGAAACCATTGGACGTATAGCAATGTGGAGCTGTATGGTTTACAATGAGACGGACGACAATGTGGACCTCAGGCTCTGCCAGGACTTTGGACTCATCTTGTCCGTCTTCTCGTTGGTGTACCTCATTGTCTGCTTTCCAGTGGGCCTTTGCTACAATGCCCTGCTGGTGGTGGTCAACCTTTCCAACAAGGTCACCATGACCATGCCCGATGTCTACTTTGTGAACATAGCCATCGCTGGCCTGGTGCTCAACTTGGTGGCTCCTGTGGCACTGCTGGGCCCCAGTTTCACCCGCTGGCCCATGTGGGAATACAACAACGAGATCTACATCACCCTCCTCATTCTGTTCAACATCTCTTCCCTGGTCATCATGTACTCCACTACCTTGCTCAGTCTGGACTATTACATTGAGCGCGCTCTCCCACGCACCTACATGTCCAGCGTCTACAACACCAAGCATGTTTGCGGCTTCATCTGGGGCGGCGCCGTCCTGACCAGCTTCTCCTCATTGCTCTTCTACGTGTGCAATCACGTGTCCACTAAGATCATCGAGTGCTCCAAGATGCAGAACAAAGAAGCGGCTGACGCCATCATGATGTTCATTGGGTATGTGGTGCCAGCAGTGGCTGTGCTTTATGCATTCGTGCTTATCCTACGCATCAGGAAGGAGTCCACCCCTTTGGACCAGGACTCTGGAAGGCTCGATCCTTCCATCCACAGGTTGCTTCTGGCTTCCGTGTGCATGCAGTTTTTACTTTGGACTCCGTATTACATGACCCTACTTGTGCACACAGTGGCAGGGGCTCCCGGAAGCCATTCCAGCAAGCAGCAACTCATCATATACTTCTTCCTGAGATGTTTGTCTAAACTTCTCGCCTTCTGCAGTAGCTTTGCCATTCCTCTCATGTACAGGCAAATGAACAAGAACTTCTCGCATAAACTCCAGAGGCTTCTAAAGAGGCTGCACTGCGGGGACCAATCATGTCCTCACGAACGCTCGACAGTTCAGCAGGTGGTCACATGAGGATTGTGTTCAATCAGACCTGCTTGTCCCTCACTGGCACTTACTCTGAATCCACAGAAGTAGAGCCAGCACATGAACCTGGATATATATTGTGCTCCAAAAAGAAAGGAAGTATTTCGCTTACCACAAGGAGTGTCTCTGTGAAATTGTGGAACCTCCATAACACTTATCGACTTGACTTTATTTGTCCATCTCTGTGGTCAATGGACGACCAAGAAGAAACCACTAAGTGCTGTTTTTGTGTAAGCTGTGTCTATTCTTTGGGTTCTAATGCTTGGGGAATATCTCAACCCGTCTGTTGGTCCTTTCAGTAACAGGGGGTTGGATGTTGAACGTGTTTAATCAGTTACAGGATATGTGGTATAGCCTTTTAACGTGATGCTTTTAGACCAACTTTTTCCCTTTTAGTTCAAGGCCGCATTCTGCCCCaggctttctttctttctttctttgcacCATAAGCTGTTCAGTCTAGAGTTTTCAGGTCACACTTTCCATAAAACCTCTCGGGTAGATGCTAGTAAACGCAATATAATTACCTCAATTTCACACACCAACGGGCATTACATTGGAACGGTCTAACCAACTTTTACAGCACCCAGAAATAGCTCGACGAGACTGATATCAGGGAGCGGGAAAGATGTGTTTGCGTGCGTGTGGTTGCCTGTCGATGgtcgtaagtgtgtgtgtgtgtgtgtgtgtgtgtgttctcgaGTGCTTGCTGCTAAGGTGATGTGCATTTTTACTGCACAGCTGCTCAGCCATAGTAATTCCTGTGTATAGAGGAATTGAGACAAAGCTATAGAAACTAGGCAACAGATCACGGTTTTAAGGTCAAATAGTTagagatgttttgtttttaaataccttttCAATCATTAGTCGGTTACTACTGGAATTATTATCAGTGCATCATGAGGAAGTGGTTGACAATTTATATGAGGAGTGAATCCAAGTTCATTTGATAAAGCAatactaccctgctgaaaaatccagcttaaaccagtctaggcttgttagctggttttagctggtaaaTAGCCTGgctttagagaggttttggccatttccaggcttgtttccagccatttccagccgggtcttagctggtcaggctggaaaatgaccagctaaatccaactaaaaccagcttgaccagcctgatttaagctggacatagctggttttggctgggctcccagcctggctaggctggttaaactggttttagctggtaatcTTCCAGCCTAAcctgctaagaccaggctggaaatggctggaaaccagcctggaaatggccaaaacctctctaaaaccagcctgatctaccagctaaaaccagccaaccagcctaggctggtttaagttggatTTTTCAGTTGGGTATCTATCGCAGGGTTGCCCAAAGTTGGTtttggagggccagtgtcttgcagagtttagttccacccccaattagacacacctgaaccagctaatcaagctctcccaagtatactagaaacttctaggcaggtgtgttgaaggaagttggagctaaactttgcaggacaccaagTTTCGGGTGATTTCCGAAAGAATTGATTGGACTTGAGTTCTCCTAATCAACGAATCCTATCAGTTCTGATGTGGATATGCTAAAGAAATCGCTTGTATTGAGATTAGTTGCATGAATGATTTCATTATATAGAGAAGATATGCATCAGCGCTCCCAATCTGGGAGAAAATCATAGACTTTTCCAGAAAATAATACCCAAGAGGCGGGATGAGAAATAGTTTATGCTAGTAAATGGTATgttattatcaaaaaaaaaagacatctttGCTCTTATTTTTCTCGAGTGGATGCAGAATAAGTATATTTTGGACAGAAAGCACTGTATGATAATAGAAGAGTGGAGAGGGGTCATTTATATCCACTTATATGTGTGCAAGGGAAAGATTGTATTTAAAGTCGCGAAGGGGATTAAAAACAGTAACCCTCAATTATAAATGGTGAAATGGCATCAAAACGCAATGTTATGGCTGTTGTTAGCGAGCTAATGCCAGTATGTATCATATTACGAATGTGTATATATTGTACTTCAGAGATTTACTGGAAGAAAAACTAAACAGACATGCCATTTTAGGTTACAGTATTATTTTCGCAGAGATTTATTTAGATACTAAAGTGTCCGTCATCCTCTGTCCCATACCGAGTCAAAGACTTGTTCAATAAACTAACATGAATATAA

Function

symbol description
gpr146 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in central nervous system. Orthologous to human GPR146 (G protein-coupled receptor 146).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
ko04030 G protein-coupled receptors

ZFIN:

id description
ZDB-GENE-050823-3 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in central nervous system. Orthologous to human GPR146 (G protein-coupled receptor 146).

Ensembl:

ensembl_id ENSDARG00000059610

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050529 True 3695 mRNA 0.45 2 45687266 45717575

Neighbor

gene id symbol gene type direction distance location
XLOC_025668 dre-mir-2195 coding upstream 52080 45635077 ~ 45635186 (+)
XLOC_025667 CR392042.1 coding upstream 80809 45602345 ~ 45606457 (+)
XLOC_025666 baiap3 coding upstream 147413 45401472 ~ 45539853 (+)
XLOC_025665 ube2ia coding upstream 313755 45364849 ~ 45373511 (+)
XLOC_025664 NA coding upstream 433734 45246037 ~ 45253532 (+)
XLOC_025670 gper1 coding downstream 39030 45756605 ~ 45770089 (+)
XLOC_025671 unkl coding downstream 61235 45778810 ~ 45818361 (+)
XLOC_025672 mrtfbb coding downstream 554336 46271911 ~ 46365456 (+)
XLOC_025673 polr3k coding downstream 662511 46380086 ~ 46384147 (+)
XLOC_025674 sc:d0202 coding downstream 707687 46425262 ~ 46427696 (+)
XLOC_025429 BX649540.1 misc upstream 15438230 30248739 ~ 30249036 (+)
XLOC_025662 CR385066.1 non-coding upstream 799113 44888037 ~ 44888153 (+)
XLOC_025660 NA non-coding upstream 1633496 44000293 ~ 44053770 (+)
XLOC_025678 NA non-coding downstream 827439 46545014 ~ 46545481 (+)
XLOC_025683 NA non-coding downstream 1080937 46798512 ~ 46803047 (+)
XLOC_025684 NA non-coding downstream 1117282 46834857 ~ 46838638 (+)
XLOC_025685 NA non-coding downstream 1390195 47107770 ~ 47109473 (+)
XLOC_025689 NA non-coding downstream 1677960 47395535 ~ 47409399 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000046_01098117_01099160 GPR146 coding CI01000046 null 1097258 ~ 1099160 (-)
bowfin (Amia calva) AMCG00018192 gpr146,LOC107703371,LOC107550312,LOC107710650,LOC107674685,LOC107565765 coding CM030135.1 CM030135.1 4124297 ~ 4125298 (-)