AMCG00018192 (gpr146,LOC107703371,LOC107550312,LOC107710650,LOC107674685,LOC107565765)


Basic Information

Item Value
gene id AMCG00018192
gene name gpr146,LOC107703371,LOC107550312,LOC107710650,LOC107674685,LOC107565765
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4124297 ~ 4125298 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018192
ATGTGGAGCTGCATGCTTTACAACGAGACAGATGACAGTTTGGACCACAAGCTCTGCCAGGACTTTGGCCTCGTCCTGTCGGTCTTCTCCCTCATCTACCTCATCATCTGCTTCCCCGTGGGCCTGTGCTACAACGCCCTGCTGGTGGTGGTGAACCTGTACAACAAGGTGTCCATGACCATGCCGGATGTCTACTTCGTCAACATCGCCATTGCCGGGCTGGTGCTCAACATCGTGGCCCCCATTGAGCTGCTGGGCCCCAGCTACACCCGCTGGCCCATGTGGGAATACAACAATGAAATCTACATCACCCTGCTGATCCTGTTCAACATCTCCTCCCTAGTCATCATGTACTCCACCACGCTGCTCAGCCTAGACTACTACATTGAGCGGGCGCTGCCACGGACATACATGTCCAGCGTCTACAATACCAAGCATGTGTGCGGCTTCATCTGGGGCGGCGCGGTGCTCACCAGCTTCTCCTCGCTGCTCTTCTACGTGTGCAACCACGTGTCCAACAAGATCATCGAGTGCTCCAAGATGCAGAACAAGGAGGCAGCCGACGCCATCATGATGTTCATCGGCTACGTGGTGCCGGCCATCGCGGTCTTCTACGCCTTCGTGCTCATCCTGCGCATTCGGAAGGAGTCCACCCCTCTGGACCAGGACTCGGGGCGGCTGGACCCGTCCATCCACCGGCTGCTGCTGACCTCGGTCTGCGTGCAGTTCGTGCTCTGGACCCCGTACTACACGACCCTGCTGGTGCACACGCTGTCCGGGGTGCAAGGGAAGTACCTCAACAGGCCGCAGATCACCACCTATTACTTCGTGAGGTATCTGTCCGAGCTGCTGGCATTCTCAAGCAGCTTCGCCATGCCGCTCATGTACTGGCGGATGAACAAGAACTTCTCGCACAAGCTCCAGCGGCTCCTCAAGAAGCTGCACTGTGGGGACCGGGGCTGCTCCCACGAGCGGTCCGTGGTTCAGCAGGTGGTCACGTAA

Function

symbol description
gpr146 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in central nervous system. Orthologous to human GPR146 (G protein-coupled receptor 146).

NR:

description
PREDICTED: probable G-protein coupled receptor 146

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08431 GPR146; G protein-coupled receptor 146

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018192 True 1002 mRNA 0.58 1 4124297 4125298

Neighbor

gene id symbol gene type direction distance location
AMCG00018194 NA coding downstream 11467 4111673 ~ 4112830 (-)
AMCG00018193 gper1,LOC106601100,LOC106607359,LOC107703333,LOC107579847,LOC107719188 coding downstream 28231 4094987 ~ 4096066 (-)
AMCG00018185 NA coding downstream 56980 4065860 ~ 4067317 (-)
AMCG00018186 NA coding downstream 66824 4033690 ~ 4057473 (-)
AMCG00018188 NA coding downstream 97372 4025743 ~ 4026925 (-)
AMCG00018195 NA coding upstream 46807 4172105 ~ 4185911 (-)
AMCG00018202 NA coding upstream 67180 4192478 ~ 4196034 (-)
AMCG00018201 NA coding upstream 70737 4196035 ~ 4197864 (-)
AMCG00018200 wdr24,LOC106578258 coding upstream 74604 4199902 ~ 4209121 (-)
AMCG00018198 rhbdl1 coding upstream 94523 4219821 ~ 4225283 (-)
G114785 NA non-coding downstream 213898 3908019 ~ 3910399 (-)
G114739 NA non-coding downstream 722359 3400432 ~ 3401938 (-)
G114720 NA non-coding downstream 982987 3140095 ~ 3141310 (-)
G114681 NA non-coding downstream 1046537 3077041 ~ 3077760 (-)
G114658 NA non-coding downstream 1126039 2996035 ~ 2998258 (-)
G114915 NA non-coding upstream 170013 4295311 ~ 4352363 (-)
G114941 NA non-coding upstream 260635 4385933 ~ 4386891 (-)
G115021 NA non-coding upstream 463997 4589295 ~ 4590068 (-)
G115037 NA non-coding upstream 554242 4679540 ~ 4679749 (-)
G115071 NA non-coding upstream 695667 4820965 ~ 4821411 (-)
G114838 NA other downstream 37266 4028016 ~ 4087031 (-)
AMCG00018142 NA other downstream 1476486 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 1514818 2609145 ~ 2609479 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 1835435 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 2056713 2006906 ~ 2067584 (-)
G115020 NA other upstream 460764 4586062 ~ 4588297 (-)
AMCG00018220 NA other upstream 520849 4646147 ~ 4651641 (-)
G115174 NA other upstream 1161088 5286386 ~ 5287873 (-)
G115183 NA other upstream 1174809 5300107 ~ 5304429 (-)
AMCG00018251 natd1,LOC107745813 other upstream 1231548 5356846 ~ 5366754 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025669 gpr146 coding NC_007114.7 CM002887.2 45687266 ~ 45717575 (+)
grasscarp (Ctenopharyngodon idella) CI01000046_01098117_01099160 GPR146 coding CI01000046 null 1097258 ~ 1099160 (-)