AMCG00018201


Basic Information

Item Value
gene id AMCG00018201
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4196035 ~ 4197864 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018201
ATGTATACCTCCGTGATCCTGGGCTGTGTCCTGGCCGTGCTGGCTGCGTCTCCAGAGCAAACGCTGGAAGGAGACGTGCCCCCAACAGAGGAGCCGATTCCCTGTGCCGAGGGCTGTACCTGCCAGCGCAATACCTTCACCTCCGAGCTCAGCGTGTACTGCAACCTTCTCAACCTCACACACATCCCCCCCGACATCCCCCCGGCCGCTCGCTCCCTGTGGTTGGACAACAACCTTTTCACCTCTCTGCCAGCCTCAGCCTTCAAAGACCTGTCCAGCCTGGAATTCCTGAACCTGGAGAGCAGCCAGCTGTCCAGCTTAGACCCCCAGGCTTTCCGCGGGCTTCGGTCCCTGTCCTACTTGCACATGGAGCGCAATCGTCTGCGTTCTCTCCCTGCTTCAATCTTCCAGAACACCCCGAGCATCACGTCCCTCAGCCTCCATAAAAACCAGCTGCTGCGCATTGAGGAGGGCCTGTTCTCTGGGCTCTCCAGCATGTGGCTGCTTAACCTGGGCTGGAACTCCCTGGTGGTGCTCCCAGAGACCAGCTTTCGGGACCTACAGGGTCTCAGGGAGCTGGTACTGGCGGGGAACAAGTTGGCCTACCTGCAGCCACAGCTCTTCCATGGCCTCGTGGAGCTAAAGGAGCTGGACCTCACAGGAAACTTCCTGAAGGTCATCAAGGCCAATGTGTTTCCGAAGCTGCCAAAGCTGCATAAGCTCTACCTGAGCCAGAACCAGATTCACACTGTAGCACCCAGAGCCTTTGTGGGCATGAAGTCCCTACGCTGGTTAGACCTCACCAACAACCGGCTGTCCGGCCTCCATGAGGAGACCTTCCTTGGCCTGCACAGCCTGCATGTCCTACGGCTCTCCAACAATGCCATTGGCCAGCTGCGCCCCAGGACCTTTCGCGACCTGCAGTACCTGGAGGAGCTGCGGCTGAGCCACAACCGCATCAAGGTGCTCGGCGATCGTGTGTTTGAGGGACTGAGTCACCTGGAGGTGCTCGAGCTGGACCACAACCAGATACAGGAGGCACGCATGGGGACTTTCTTCGGCCTGCCCCACCTGGCAATCATAAATCTGTCCGGTAGCTGCTTCGGGAGCTTCCCGGATCAGGTCTTCAAGGGCTTGTCTAAGCTGCACAGCCTGCACCTGGATAAGAGCTGCCTGGTCAAAATCTCACCTCAGGGTTTATCCGGGCTGACGGGACTAAGGCGGCTCTTCCTGCAGCGCAACAACATCTCTCTGATCGAGCGCCAGAGCTTCGCGGAGCTCCCAGGGCTTCAGCAGCTGGACCTGAGGTTCAACAATCTGGAGTCCCTGTCTTCTCACACATTTTCTGGTTTGAAGAACCTGGAGTACCTGCTGCTGGGCGGCAATCTGCTCCAGCAAGTCCCCACGGAGGTCTTCCTTCCCCTCCAGTGCCTGTCCTGGCTGGATCTGTCTTCAAACAAGCTGGAGTCTCTCCTGAACGGCACCCTGCAGCTCCTCCCCAAGCTGCGCTATCTGAACCTCAAGGACAACGCCCTGACCACCTTCCCCGCCGAGATCCCCGACAGTATGGATCAGCTGTGGCTGGGCGGGAACCGTTGGAACTGCGACTGCACCGCCCTGCCCCTCAGGGATTACAGCCTGAGCAAACCGAGAGCGGTCCCCCGTCAGGTGGAGACCCTGGTCGAGGGAGAGGAGCCGTACTCGGTTGTCCAGGTCTACAACAACATCACCTGCAGCAGCCCCTCCAGCTTAGCTGGGTCCGACCTGCGGGACATTGGCAATGAACACTTCCAGGGTTGCCCGCTAAACTCTGCGAAGGTGGAAGGATAG

Function

GO: NA

KEGG:

id description
K17256 IGFALS, ALS; insulin-like growth factor-binding protein complex acid labile subunit

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018201 True 1830 mRNA 0.59 1 4196035 4197864

Neighbor

gene id symbol gene type direction distance location
AMCG00018202 NA coding downstream 1 4192478 ~ 4196034 (-)
AMCG00018195 NA coding downstream 10124 4172105 ~ 4185911 (-)
AMCG00018192 gpr146,LOC107703371,LOC107550312,LOC107710650,LOC107674685,LOC107565765 coding downstream 70737 4124297 ~ 4125298 (-)
AMCG00018194 NA coding downstream 83205 4111673 ~ 4112830 (-)
AMCG00018193 gper1,LOC106601100,LOC106607359,LOC107703333,LOC107579847,LOC107719188 coding downstream 99969 4094987 ~ 4096066 (-)
AMCG00018200 wdr24,LOC106578258 coding upstream 2038 4199902 ~ 4209121 (-)
AMCG00018198 rhbdl1 coding upstream 21957 4219821 ~ 4225283 (-)
AMCG00018199 rhbdl1,LOC102790881,LOC107677126 coding upstream 44414 4242278 ~ 4260750 (-)
AMCG00018206 rhot2 coding upstream 102691 4300555 ~ 4313367 (-)
AMCG00018207 LOC107677127 coding upstream 117398 4315262 ~ 4331175 (-)
G114785 NA non-coding downstream 285636 3908019 ~ 3910399 (-)
G114739 NA non-coding downstream 794097 3400432 ~ 3401938 (-)
G114720 NA non-coding downstream 1054725 3140095 ~ 3141310 (-)
G114681 NA non-coding downstream 1118275 3077041 ~ 3077760 (-)
G114658 NA non-coding downstream 1197777 2996035 ~ 2998258 (-)
G114915 NA non-coding upstream 97447 4295311 ~ 4352363 (-)
G114941 NA non-coding upstream 188069 4385933 ~ 4386891 (-)
G115021 NA non-coding upstream 391431 4589295 ~ 4590068 (-)
G115037 NA non-coding upstream 481676 4679540 ~ 4679749 (-)
G115071 NA non-coding upstream 623101 4820965 ~ 4821411 (-)
G114838 NA other downstream 109004 4028016 ~ 4087031 (-)
AMCG00018142 NA other downstream 1548224 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 1586556 2609145 ~ 2609479 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 1907173 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 2128451 2006906 ~ 2067584 (-)
G115020 NA other upstream 388198 4586062 ~ 4588297 (-)
AMCG00018220 NA other upstream 448283 4646147 ~ 4651641 (-)
G115174 NA other upstream 1088522 5286386 ~ 5287873 (-)
G115183 NA other upstream 1102243 5300107 ~ 5304429 (-)
AMCG00018251 natd1,LOC107745813 other upstream 1158982 5356846 ~ 5366754 (-)

Expression


Co-expression Network