RNA id: AMCG00018201


Basic Information

Item Value
RNA id AMCG00018201
length 1830
RNA type mRNA
GC content 0.59
exon number 1
gene id AMCG00018201
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4196035 ~ 4197864 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTATACCTCCGTGATCCTGGGCTGTGTCCTGGCCGTGCTGGCTGCGTCTCCAGAGCAAACGCTGGAAGGAGACGTGCCCCCAACAGAGGAGCCGATTCCCTGTGCCGAGGGCTGTACCTGCCAGCGCAATACCTTCACCTCCGAGCTCAGCGTGTACTGCAACCTTCTCAACCTCACACACATCCCCCCCGACATCCCCCCGGCCGCTCGCTCCCTGTGGTTGGACAACAACCTTTTCACCTCTCTGCCAGCCTCAGCCTTCAAAGACCTGTCCAGCCTGGAATTCCTGAACCTGGAGAGCAGCCAGCTGTCCAGCTTAGACCCCCAGGCTTTCCGCGGGCTTCGGTCCCTGTCCTACTTGCACATGGAGCGCAATCGTCTGCGTTCTCTCCCTGCTTCAATCTTCCAGAACACCCCGAGCATCACGTCCCTCAGCCTCCATAAAAACCAGCTGCTGCGCATTGAGGAGGGCCTGTTCTCTGGGCTCTCCAGCATGTGGCTGCTTAACCTGGGCTGGAACTCCCTGGTGGTGCTCCCAGAGACCAGCTTTCGGGACCTACAGGGTCTCAGGGAGCTGGTACTGGCGGGGAACAAGTTGGCCTACCTGCAGCCACAGCTCTTCCATGGCCTCGTGGAGCTAAAGGAGCTGGACCTCACAGGAAACTTCCTGAAGGTCATCAAGGCCAATGTGTTTCCGAAGCTGCCAAAGCTGCATAAGCTCTACCTGAGCCAGAACCAGATTCACACTGTAGCACCCAGAGCCTTTGTGGGCATGAAGTCCCTACGCTGGTTAGACCTCACCAACAACCGGCTGTCCGGCCTCCATGAGGAGACCTTCCTTGGCCTGCACAGCCTGCATGTCCTACGGCTCTCCAACAATGCCATTGGCCAGCTGCGCCCCAGGACCTTTCGCGACCTGCAGTACCTGGAGGAGCTGCGGCTGAGCCACAACCGCATCAAGGTGCTCGGCGATCGTGTGTTTGAGGGACTGAGTCACCTGGAGGTGCTCGAGCTGGACCACAACCAGATACAGGAGGCACGCATGGGGACTTTCTTCGGCCTGCCCCACCTGGCAATCATAAATCTGTCCGGTAGCTGCTTCGGGAGCTTCCCGGATCAGGTCTTCAAGGGCTTGTCTAAGCTGCACAGCCTGCACCTGGATAAGAGCTGCCTGGTCAAAATCTCACCTCAGGGTTTATCCGGGCTGACGGGACTAAGGCGGCTCTTCCTGCAGCGCAACAACATCTCTCTGATCGAGCGCCAGAGCTTCGCGGAGCTCCCAGGGCTTCAGCAGCTGGACCTGAGGTTCAACAATCTGGAGTCCCTGTCTTCTCACACATTTTCTGGTTTGAAGAACCTGGAGTACCTGCTGCTGGGCGGCAATCTGCTCCAGCAAGTCCCCACGGAGGTCTTCCTTCCCCTCCAGTGCCTGTCCTGGCTGGATCTGTCTTCAAACAAGCTGGAGTCTCTCCTGAACGGCACCCTGCAGCTCCTCCCCAAGCTGCGCTATCTGAACCTCAAGGACAACGCCCTGACCACCTTCCCCGCCGAGATCCCCGACAGTATGGATCAGCTGTGGCTGGGCGGGAACCGTTGGAACTGCGACTGCACCGCCCTGCCCCTCAGGGATTACAGCCTGAGCAAACCGAGAGCGGTCCCCCGTCAGGTGGAGACCCTGGTCGAGGGAGAGGAGCCGTACTCGGTTGTCCAGGTCTACAACAACATCACCTGCAGCAGCCCCTCCAGCTTAGCTGGGTCCGACCTGCGGGACATTGGCAATGAACACTTCCAGGGTTGCCCGCTAAACTCTGCGAAGGTGGAAGGATAG

Function

GO: NA

KEGG:

id description
K17256 IGFALS, ALS; insulin-like growth factor-binding protein complex acid labile subunit

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU143819 lncRNA downstream 109004 4028016 ~ 4087031 (-) False G114838
TU143822 lncRNA downstream 109004 4028016 ~ 4087031 (-) False G114838
TU143815 lncRNA downstream 131787 4028016 ~ 4064248 (-) True G114838
TU143814 lncRNA downstream 131787 4060811 ~ 4064248 (-) False G114838
TU143817 lncRNA downstream 131787 4060811 ~ 4064248 (-) False G114838
TU143920 lncRNA upstream 97447 4295311 ~ 4352363 (-) True G114915
TU143950 lncRNA upstream 188069 4385933 ~ 4386891 (-) True G114941
TU144051 lncRNA upstream 391431 4589295 ~ 4590068 (-) True G115021
TU144070 lncRNA upstream 481676 4679540 ~ 4679749 (-) True G115037
TU144111 lncRNA upstream 623101 4820965 ~ 4821411 (-) True G115071
AMCG00018202 mRNA downstream 1 4192478 ~ 4196034 (-) True AMCG00018202
AMCG00018195 mRNA downstream 10124 4172105 ~ 4185911 (-) True AMCG00018195
AMCG00018192 mRNA downstream 70737 4124297 ~ 4125298 (-) True AMCG00018192
AMCG00018194 mRNA downstream 83205 4111673 ~ 4112830 (-) True AMCG00018194
AMCG00018193 mRNA downstream 99969 4094987 ~ 4096066 (-) True AMCG00018193
AMCG00018200 mRNA upstream 2038 4199902 ~ 4209121 (-) True AMCG00018200
AMCG00018198 mRNA upstream 21957 4219821 ~ 4225283 (-) True AMCG00018198
AMCG00018199 mRNA upstream 44414 4242278 ~ 4260750 (-) True AMCG00018199
AMCG00018206 mRNA upstream 102691 4300555 ~ 4313367 (-) True AMCG00018206
AMCG00018207 mRNA upstream 117398 4315262 ~ 4331175 (-) True AMCG00018207
TU143816 other downstream 131787 4060811 ~ 4064248 (-) False G114838
TU143456 other downstream 1586556 2609145 ~ 2609479 (-) True G114549
TU143313 other downstream 1907173 2281700 ~ 2288862 (-) True G114430
TU143230 other downstream 2128451 2006906 ~ 2067584 (-) False AMCG00018111
TU143224 other downstream 2189399 1985149 ~ 2006636 (-) False AMCG00018113
TU144050 other upstream 388198 4586062 ~ 4588297 (-) True G115020
TU144068 other upstream 448713 4646577 ~ 4651612 (-) False AMCG00018220
TU144242 other upstream 1088522 5286386 ~ 5287873 (-) True G115174
TU144251 other upstream 1102243 5300107 ~ 5304429 (-) True G115183
TU144253 other upstream 1102243 5300107 ~ 5304388 (-) False G115183

Expression Profile