AMCG00018188


Basic Information

Item Value
gene id AMCG00018188
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4025743 ~ 4026925 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018188
ATGCTGCTGGGTGCCCTGACTGGTCCCGGTGGACACTGCGAGCCAGAGGGGGGGGCAGCGTCAGCTTCTCACAGTCTCCTCCAGTCTGGCTCACAAAGCATCTCTGAGATGGACTGGATGGGCGAGAGGATGGACGTCTACCTCCTGGATAGCCTCATCGAAGATGGGCCGATGCCCTCCGAGGACCTCCCGCGGGGGGTGCGGAGGGGTGTGAAAGTCCAGGCCGAAATCTCAGCCGCTCCTCCTGCAGACGGAGGGTCGCCAGCGTGGCGGGACTGGGCCAGCGATCAGGTGGCTCCCTACACGCCTCCCCGCTCCCCGGACTCTCCGGTGCATAGAGCCAACGGCCCGTATGCCCTGGCCTCCGCTCAGCCCAGCAGGCTCCTGGCGTACGCACCCGTGAGGGTGGTGAAACTGGCCTACGATTCTTTGTTGAGCAGCACCGGGCCGGCAGCTCCCTCCGACGCCGAGAGTTCAGAGTGTGATGACCGGGGCCAGGTACCGCTGAAACATCCCGCTCACTGCCCGCCCAAAATCCTCCGTGGGGGCGGCTCTCCGTGTAGAGTGACGGAGGCCACTGCCGCTCCCTCCTCTGCCAACCCTAACCGCAAGCACAAGAAGAAGGAGCAGAACAAAACCGCAGCGACCCGGTATCGCCAGAAGCAGAGGACCAAGAGAGCAGTGCTGGAAGGGGAGCTGGGCGAGCTGCTCTGCAGGAACAAGGCGCTGCGGGAGAGACTGGCCTCGCTGGCGGCCGAGACCCGGTGTCTGAGAGGCCTGCTGACCGAGATCCGGAGCGCGGGGGCGGACCAGGGTGGCACTGGTAGCTGTGACTCTGCTGTAGAGCGCAAGACGGGAGATAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018188 True 867 mRNA 0.65 2 4025743 4026925

Neighbor

gene id symbol gene type direction distance location
AMCG00018187 tsr3 coding downstream 6919 4013931 ~ 4018824 (-)
AMCG00018177 cog7 coding downstream 199179 3815535 ~ 3826564 (-)
AMCG00018176 NA coding downstream 216223 3778175 ~ 3809520 (-)
AMCG00018171 NA coding downstream 541840 3481708 ~ 3483903 (-)
AMCG00018170 hs3st4,LOC103360498,LOC107568293 coding downstream 625824 3399293 ~ 3399919 (-)
AMCG00018186 NA coding upstream 6765 4033690 ~ 4057473 (-)
AMCG00018185 NA coding upstream 38935 4065860 ~ 4067317 (-)
AMCG00018193 gper1,LOC106601100,LOC106607359,LOC107703333,LOC107579847,LOC107719188 coding upstream 68062 4094987 ~ 4096066 (-)
AMCG00018194 NA coding upstream 84748 4111673 ~ 4112830 (-)
AMCG00018192 gpr146,LOC107703371,LOC107550312,LOC107710650,LOC107674685,LOC107565765 coding upstream 97372 4124297 ~ 4125298 (-)
G114785 NA non-coding downstream 115344 3908019 ~ 3910399 (-)
G114739 NA non-coding downstream 623805 3400432 ~ 3401938 (-)
G114720 NA non-coding downstream 884433 3140095 ~ 3141310 (-)
G114681 NA non-coding downstream 947983 3077041 ~ 3077760 (-)
G114658 NA non-coding downstream 1027485 2996035 ~ 2998258 (-)
G114915 NA non-coding upstream 268386 4295311 ~ 4352363 (-)
G114941 NA non-coding upstream 359008 4385933 ~ 4386891 (-)
G115021 NA non-coding upstream 562370 4589295 ~ 4590068 (-)
G115037 NA non-coding upstream 652615 4679540 ~ 4679749 (-)
G115071 NA non-coding upstream 794040 4820965 ~ 4821411 (-)
AMCG00018142 NA other downstream 1377932 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 1416264 2609145 ~ 2609479 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 1736881 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 1958159 2006906 ~ 2067584 (-)
AMCG00018113 NA other downstream 2019107 1985149 ~ 2006636 (-)
G114838 NA other upstream 1091 4028016 ~ 4087031 (-)
G115020 NA other upstream 559137 4586062 ~ 4588297 (-)
AMCG00018220 NA other upstream 619222 4646147 ~ 4651641 (-)
G115174 NA other upstream 1259461 5286386 ~ 5287873 (-)
G115183 NA other upstream 1273182 5300107 ~ 5304429 (-)

Expression


Co-expression Network