XLOC_002794 (sod1)


Basic Information

Item Value
gene id XLOC_002794
gene name sod1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 25694395 ~ 25716953 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005170
TGGTCGATTCCGCTCACGTGCCTCCTCTTATCAAACACAGTCGGTTTCTTTCACTCTCTCACAACTTCTCAGTTTGCATAATCTACAGTCAGCATGGTGAACAAGGCCGTTTGTGTGCTTAAAGGCACCGGTGAAGTGACCGGCACCGTCTATTTCAATCAAGAGGGTGAAAAGAAGCCAGTCAAGGTGACTGGTGAAATTACTGGCCTTACTCCAGGAAAACATGGTTTCCACGTCCATGCTTTTGGTGACAACACAAACGGCTGCATCAGTGCAGGTCCGCACTTCAACCCTCATGACAAAACTCATGGTGGGCCAACCGATAGTGTGAGACACGTCGGAGACCTGGGTAATGTGACCGCTGATGCCAGTGGTGTTGCAAAAATTGAAATCGAGGATGCAATGCTGACTCTGTCAGGCCAACATTCTATTATTGGGAGGACCATGGTGATTCATGAGAAGGAGGATGACTTGGGGAAGGGTGGCAATGAGGAAAGTCTTAAAACTGGCAACGCTGGTGGTCGTCTGGCCTGTGGAGTGATCGGCATCACTCAGTGAATCTGCTCTAATGGAAGAGCCGGTTGAAATATTGGTGACCAATGTGGATGCCTCTGAAAGCACTTAGCCCGCTGACAATTACATCTCTATTTTTGTTAGGTAACGTTGAAAGAATTGTACTTTAGCCTTGTTAAGCTGTTTTTCTGTGCATTTCTATGTGGGCAACCTTTTATTTGTTATCTGCTTAATTCATTAAACATTGAGCAGACTGGAAA
>TCONS_00005171
GGTGAACAAGGCCGTTTGTGTGCTTAAAGGCACCGGTGAAGTGACCGGCACCGTCTATTTCAATCAAGAGGGTGAAAAGAAGCCAGTCAAGGTGACTGGTGAAATTACTGGCCTTACTCCAGGAAAACATGGTTTCCACGTCCATGCTTTTGGTGACAACACAAACGGTAAGGAGTGGTCAAACTGAACATTTAGCGATTATTATGGCCCACATGATGATTTATATCGCTTCATTTCTCCCCCCATTTTGTGCATTCACCACCCTATTAAATGAGATCCCAGGTGTAAACAACCTCCTTGTGAGCAAAATGCATCATAATTTCAGGTGTAAACGGGGTGTCAGGGTATGCCACTCCATTCATTAAagcagtgtttttcaaccacgtTCCAGGAGGATCATCAGTTCTGcatattttccatgtctccttaaccaaacacacctgattcagatcatcagctccaggaacatggttgagaaacactgcattaaagtaCAAGTTCATCCCATCAGGACCAATAACCTTGACCTAAAACCATTAGACTCCATTTTTTACCTGGTTCTGAATCCAAAGTGAAGGAGTAAACAGCTCTGAAAAGTTTTTAAATTCTCCACTTACATACTTTCATAGTGTAAGCACTTAATG
>TCONS_00005172
CGACTTTTCCTGCGTGCTCTCAGCGCCATCTAGTGCTCGTGCTTCGCCAAAGCAGCGTTTCAATCCCATCCTGCACCGCGAGCACCGCGCCGACTCCGAGTCCGAGCTGTCTGTCTGCTGCCAGGGGCGGACATGTTGGGGCGGCCTGCTGGAGGACAGTACCACACATATTTCTGAATTTACCCGAGAAAGCGACCGCGGAGCAGAGACGGGACGCCATGGACGCCGTCAACGCGTTTAATCACGAGTTGTTCTCCTTGATGGACACCAAGCCCCCCATCTCGAGGGCCAAGATGATCTCTATCACCAAATCTGCCATAAAAGCTATCAAATTATACAAGCATGTTGTCCAGATAGTGGAAAAGTTCATAAAGAAGTGCAAACCGGAGTACAAAGTTCCCGGTCTCTATGTGGTGGATTCCATTGTGAGACAGTCACGGCATCAGTTTGGAGCAGATAAAGATGTGTTTGGACCCAGGTTTACTAAAAACATCACTGGGACATTTGAGAATCTATGCTTGTGTCCCACTGAAGATCGGagtaagATAGTACGAGTGCTCAACCTGTGGCAGAAGAATGGAGTGTTTAAGATCGAGGTCATTCAGCCTCTGTTGGACATGGCTGCTGGGTCCAGCAGCTCCTCAGGCTTGGACAATGGCCCAGATGCAGcttctccacagtCTCCCGTGAGGGAACAGGAGGCTCATCCTGTGGTGACGACAAACTCAATTGTAGCAGCTGTGCCTCAGCTTCAGAACTCGGATGCCTTTGCTGCAGTTGCTCAGCTAATTCAGTCTTCTCAAGGACAGCAGCTTCAGCAGATGCTGCAGAACTTTCAGCCACCAGGGAAACCTCAGTCTCCGGTGGTGGACAATAACAGGAGTCATCTCCATCTACAAGCCCAGGCTATAGCACCCCCATCCACCATCCCACATCAGCACATCCATCACGCACCGCAGCCTGTGGAAAAGAAAGCCACCTTCGACAAGacaattcTTGACCGCTTTGACTATGACGATGAGCCAGATGCAGGAGAGGATGCCAAGAAGGAGGAAGCGCAGTCTGTCCAACCTTCTATGGGTTTTCCTGAGCAAACTGTCCCAGGATTTcctccagccaatcagatgcAGCACTTTCAACAGCATATGATGGCTGTATCACAGCGCCAACAGGTTGTTCTACCTTCAAATGGACAGGTCCAAGGCTTTGGTCTCATGACCTCTCAGCCCTATCCAGGCATGATGCCTCCAATGGGGCAGCCGAACGCAGCTTTCCCTCCTCAAAATGAGGCCTTCAATCAACTCATGTCTGGACATGCGGAAAGTCTGATGAATTCAGATGCATCTGCGAGGTCTGCCCATGAAGACAAGAGGTCAAGGTCACGCTCGGGGTCGAGGTCTCCTAAAAGAAGAAGGTCTCGATCCAATTCCCGGTCCAGACGAATGAGGCATCGACGATCTCGGTCTCGAGAACGGCGGCGTCAGTCACCTCGCTCGCGCTCTCAGGAAAGGAGAGACAGAGAAAAGGAAAGAGAACGAAGACAGAAAGGCCTCCCtcctgttaaaaataacacaCTCAGTGTGTGCAGCACAACTCTATGGGTGGGTCAGCTGGATAAGAGGACACAGCAGCAGGACGTGGCCTCTATACTAGAGGAGTTTGGCCAGATAGATTCAATTAATATGATTCCTCCACGAGGTTGTGCCTACATCGTCATGATTCATCGTCAAGATGCCTATCGAGCCCTGCAAAAACTAAGCAGAGGTCCATACAAAGTCAACCAGAAAGCCATTAAGATTGCCTGGGCTCTAAATAAGGGCATTAAGGCTGAATTCAAGCAGTATTGGGATGTGGAATTGGGTGTTACCTATGTTCCATGGTCCAAGGTAAAGATGGAGGACTTGGACGTATTCAGAGAAGGAGGGATGCTGGATTCTGACACTCTTGCGCCAGAATGGCGAAACTCTCAGATTGAACAGAAGACTGATGAGTCTCAGAACGGCCGGCCAGAGGTGGGAAAAGTGGAAGAGACCCAAACTGTCATACCTATGCAGGTTCCTCCTGTCCAGCCAATAGGAGCAGTCGGTGTCCCACCTCCGGGATTCCCAGCACACATGAACATCCCACCACCCTCATTCCCACCTGGTGTTCCTCCACCTCCAGGTCCCTTCATGCGGCCAGCCTTTAACCCCATGCAGATGCCACCAGGATTTCTCCCACCGggtgccatgccccatatgggtGCTGCTGGCCCTCCTCCACCTACAGCAGGCATCGGGATGCCTCCAGTTGGCAGCTCTGTTGAAAACCTGTCGAATGATTCAGCAGGTCTGGGCCCAAAAATCAGCACTGATGGAGCAGATGTGTTCAACTCAGGAAACCAGGTGCCTCCTGGAGCTCCACCAGGGATGGGCATGCAGTCTCCTCCTGGTCTTCTTGGCACAAGGCCAGGTATGATGCCTCTTCAGCGGCCCCCGGGGATGCCACCTCCGCACATGCAGCGATTCCCCATTCCCCCACCTCGGGCAGGCATGCCACCCATGCCACCACAGATGAtgccacccaggggtccacctcagATGATGCACCGCGAACCTCCACCGGGTGGTTTCAGCATGCCTCCTCCACCTCATGGCATCCGGGGACCGTTCCCACCTCCCGGACCTCACTTTATGAGGCCGAGCTTACCAAGGCCTGAGGGGCCAAATGATCATGAGGCTCGACCTTTTAGAGGAGAACGTCCCGGATTAGGAAGAGGCCGAGAGCAGGACTGGTTTGGAGGACGACGGCCTTTTGGTGAGGGACGTGGTGGGGAAAGACCAGATGGACGTGAGCGGTTTGGAGGATGGCACGAGGAGCCAGAGAAACCAGGTGGGTGGGAAAGAGAACGCAGGGAGGAACGCTGGAGGAGAAGTCCAGATGGAGAACGAGGACGTGATGGTGGAGAGAGGGAACGAGGACGCGATGGTGGAGAGAGGGAAAGAGGACGCGATGGTGGAGAGAGGGAACGAGGACGTGATGGTGGAGAGAGGGAACGAGGACGCGATGGTGGAGAGCGGGAACGAGGACGCGATGGTGGAGAGCGGGAACGAGGACGCGAAGGTGGAGAGAGGGAACGAGGACGCGATACTGGAGAGCGGGAACGAGGCCGCGATGGTGAAGAACGGACCAAGCGGCCCGCAGGGAGCAGAGAGAGGAGCACACGCTGGGACCGCGACGATAGACTCGATCGATTGGGTCTGGCCGGCGAGGAACCCAATGAGAGACTCTCAGCAAATACCAACGAGCCCAGTGCAAACCCTACTAAAGAACTTGCTGAAGCCAAGCCAGATGTTCCAGCACCTTCTGCTGCAGCTACAGCAGACTCGGAAGCTTCAGAACCCATAGCAGAGAACAAATCTGAAGAACAAACACAAAAAGAGGAGTCGTAGAGGCTTCTTTACTCATTAAGACCACATGAGCTTCTTCTGTGTCAGTGCTAATCTTGAATACTGCTGGCTAAAAAGCAAAGTCCAACTGTTGTGGGACGCTTTATGCATATGAGGATTGCTTCGTCATCACAAACCAAGTTTTTCAAATTTGTGTTTTGGCAAACGTGGAGCGTTGCCTTGTGAATTTATTGTCCCACCTCAATGAAGCTTGAATGTTGTATTAAAACTGAAGATAAGGAAAAGAAACGATTAATTGTTTGCTGTACATATGCTAACATTACTCCAATAATGTTTGTAGATTTtgactggctttttttttttccaatgataTCCCTGTTGAGTTTAATATTTGGAAACGCTGACTAAAATATGACATTAAGACCCTTTTGCTGTAATGTTTTTAACTTAATGTTTacaacattcaaaaaaaaaaaaaaaaaaaacgacacaagatgtttttatcatttttaagttTTTGGAGATAGGAACTCCAAATATTTCAGCGACAGGAGGtggttttaataaaatattttcataccAAATGAATGAACTGGTTTATGCAActtgtttttaacatttattctaGTCGTGCATTTAAAACTAATCATGAATAAAAAAACTGAGCTTTTTCTGAGCTTTTAACTATATTTAACCAGTTTTATTATGATTTGTGGTAGTTATCATGTGACACTGTACCAAAACCATTTGTAATGGTTTGAATAGGATgtctacagtatatgtatatgAATAGGGCATGACTGTAGAATTTGAGGATGCATGTGACCAAATGCCAAGGTCAAAGTGACAAACATGGTTTTGATATATTccttttttaaagaataataCTATAGGACTGTGTAATTTGAGCCAAATAACTATATGTACTAACTATTCACTCAACTTCAAGTGGTTCAATCAATGTGTGAGCTTTTTGTCTGATGTAAAGCACATGAgtatagatattttaaagaatactgGAAACTGGTAGCCTTATATATCCATAGTAGGGACCAATTACATAAAATTCAATGCCcaccggtttctaacattcttcgaAGATCGTTAAACAgaagaaattcaaacaggtttgcaaCAGGTGGAAggtaagtaaatgacagaatcttCATATTTGGGTGTCCTGTACCTTTGAATGTACCACATAGGTAGCCAAAATAATACATGTGATGTACATTCTTATTGAAACCACTTTATGATCAGAAATATTTATACTGTaacaaataatgagaaagataTTGTTATAACTTCTTTTATTGTCTGAAAATCTAAGTTTAACTGGTTTAACTTTtactcttacttttttttttcaaagtgactTGCATTGAGCAAGAAAAGGATGTTATTcagaaacttcattcattcatttttcttcggggtagtccctttattcatcaggggtggccacaatGGAACGAGACAgaaacttattcagcatattttaTTACTAAGCGGATGCTgtttcagtactgggaaacaaccaaacacactcattcacacatacactatggccaatttagttaatacaatttacctatagtgcatgtctttgtcatgtaggggaaaccgaagcaaccggaggaaagccacgccaacacatggagtacatgcaaactctacatagaaatgccaactaagctaGCTgtaactcgaaccagcaatcttcatgctgtgaggcgacagtgttaaccattAAGCCGCCGTGtcgtaaatgtaattaaaatggcAAGAAAAGTGACAAGAGTTTACTTTCAGTGTCAGTTtatataactaataaaataactaaagtaACTGGTTCCACAAGTTCATTCAAAACGATACCTTATGACACCGTGACACGCCAGACTTTGAACCAATCAGCATCCACCGCTCTTTTCTGCCTCCTCATTGGTCGATTCCGCTCACGTGCCTCCTCTTATCAAACACAGTCGGTTTCTTTCACTCTCTCACAACTTCTCAGTTTGCATAATCTACAGTCAGCATGGTGAACAAGGCCGTTTGTGTGCTTAAAGGCACCGGTGAAGTGACCGGCACCGTCTATTTCAATCAAGAGGTAAAAAATGTCTGTTTTGATCCATATTTGAAATGACGTTCATGTAGCAGGAGAGCAGCGCGCGCGTCGAGCTAGCATGAAACTACTACGCACTCCATGATCGAGATTGAAGACGTCTGTTGTCATATTTTTACGTATGCATGATGATAGAGTAGCATGCAATTGCACGGAATTTGCTGTGCGAATGCAATGCAAATATAAATGACCGAACATGTTTAAAAACACAATGTTGAGTTGTACATCCTATTACTAATATTTTGTGCAATGTCGCATCCCATAATAAACCGCTGAAAGCAGCTCAGAAATGACCTTTGATAAGATGGCAGGTCTACGCCCCCCCATGCACGCGCAAACTAATTAACGCATATGCTTCCTCAATAGCAGACGTTAACTTACATGCAAACCTTGAACCGCCATGCGTTTGAGTTTGATATTGAGACTTTGTAGCGTAGGTTGCCTGTAGGTTCTTGAGGTATTTACTTTATCGAAAGTCTTAAGAATTTACTACAAGGGGAAAGGTTTGCTGACTCATGCTCCTCTATCTCTGTTTGCAGTCATAATTTTGCCAAATAGGACAGAGATCACAGCACGCTTTAAATGCTGATAGAGCTTATTACTGTATTGGTGTGGCATCTGAATACACATTTACTTGCTGTTAAGCGCTATTTACTGTTTGTGTTAGTCCCAAATCTcgttatattgttttaatttgtctTTAGCCTTCCctataataatttaatgtttaaattgtgAAGTTCTTCTGTATTTTATCCAGCAGCGCTTCAAGTATCtgttgaggtaaagttagttgtatatttgcatattcagtctttctccttaataatataatttcaccaaagaaaatcaattaaaattCTAAATAGTAAATCATATAAtcactttcaaagtacaacattgttcactatCAAACTAtttgtgctaatgttgttttaaagttaaACTTGCGTTCATACCAAATattgaaagtaaaaaaatataaaaatatagggGGTATTTCATAAGTtttcactgaatgaatgtgcggatgtaaaaccaactttacctcaatcaagtATTCAATATGTCATCGAggcatgttttgattttttaaatttattttttttattactcaaaTCTATTAAAACAAGTTTCATGATCTTTTCTtccatattttaatgtatatctgAGTAAAATGTCTGTAACGAGGACAAAGGTTGAAgagtaaaaaatttttttttttccatgaatTGATTTGAATGTTGTGGTTTTCTATTAGTTGAGCTTGGGTGATTTATGACTTGTATTGATAAACCTCTCATAAAATAAGTGACATTGCAAGAAAGCAAAATAAGCATATTGTCACTTTTGATTCCGTGTTGAGATAAACATGCAGTGCATTCCAGGTGTACATTTGGAAACAAATTGTCTGTATGATGTGTTTTGCAGCCAAGCATAACTTGGTTAACTGCGCTTTTGTTTTGTGAAATGATATGAAACCATGTTTTCTGAAGTGATATGAAACCGTTGTTAACCACACAATGGATCTGTATGTTTTAGGGTGAAAAGAAGCCAGTCAAGGTGACTGGTGAAATTACTGGCCTTACTCCAGGAAAACATGGTTTCCACGTCCATGCTTTTGGTGACAACACAAACG
>TCONS_00005173
GTCTGCTGCCAGGGGCGGACATGTTGGGGCGGCCTGCTGGAGGACAGTACCACACATATTTCTGAATTTACCCGAGAAAGCGACCGCGGAGCAGAGACGGGACGCCATGGACGCCGTCAACGCGTTTAATCACGAGAGTTGTTCTCCTTGATGGACACCAAGCCCCCCATCTCGAGGGCCAAGATGATCTCTATCACCAAATCTGCCATAAAAGCTATCAAATTATACAAGCATGTTGTCCAGATAGTGGAAAAGTTCATAAAGAAGTGCAAACCGGAGTACAAAGTTCCCGGTCTCTATGTGGTGGATTCCATTGTGAGACAGTCACGGCATCAGTTTGGAGCAGATAAAGATGTGTTTGGACCCAGGTTTACTAAAAACATCACTGGGACATTTGAGAATCTATGCTTGTGTCCCACTGAAGATCGGagtaagATAGTACGAGTGCTCAACCTGTGGCAGAAGAATGGAGTGTTTAAGATCGAGGTCATTCAGCCTCTGTTGGACATGGCTGCTGGGTCCAGCAGCTCCTCAGGCTTGGACAATGGCCCAGATGCAGcttctccacagtCTCCCGTGAGGGAACAGGAGGCTCATCCTGTGGTGACGACAAACTCAATTGTAGCAGCTGTGCCTCAGCTTCAGAACTCGGATGCCTTTGCTGCAGTTGCTCAGCTAATTCAGTCTTCTCAAGGACAGCAGCTTCAGCAGATGCTGCAGAACTTTCAGCCACCAGGGAAACCTCAGTCTCCGGTGGTGGACAATAACAGGAGTCATCTCCATCTACAAGCCCAGGCTATAGCACCCCCATCCACCATCCCACATCAGCACATCCATCACGCACCGCAGCCTGTGGAAAAGAAAGCCACCTTCGACAAGacaattcTTGACCGCTTTGACTATGACGATGAGCCAGATGCAGGAGAGGATGCCAAGAAGGAGGAAGCGCAGTCTGTCCAACCTTCTATGGGTTTTCCTGAGCAAACTGTCCCAGGATTTcctccagccaatcagatgcAGCACTTTCAACAGCATATGATGGCTGTATCACAGCGCCAACAGGTTGTTCTACCTTCAAATGGACAGGTCCAAGGCTTTGGTCTCATGACCTCTCAGCCCTATCCAGGCATGATGCCTCCAATGGGGCAGCCGAACGCAGCTTTCCCTCCTCAAAATGAGGCCTTCAATCAACTCATGTCTGGACATGCGGAAAGTCTGATGAATTCAGATGCATCTGCGAGGTCTGCCCATGAAGACAAGAGGTCAAGGTCACGCTCGGGGTCGAGGTCTCCTAAAAGAAGAAGGTCTCGATCCAATTCCCGGTCCAGACGAATGAGGCATCGACGATCTCGGTCTCGAGAACGGCGGCGTCAGTCACCTCGCTCGCGCTCTCAGGAAAGGAGAGACAGAGAAAAGGAAAGAGAACGAAGACAGAAAGGCCTCCCtcctgttaaaaataacacaCTCAGTGTGTGCAGCACAACTCTATGGGTGGGTCAGCTGGATAAGAGGACACAGCAGCAGGACGTGGCCTCTATACTAGAGGAGTTTGGCCAGATAGATTCAATTAATATGATTCCTCCACGAGGTTGTGCCTACATCGTCATGATTCATCGTCAAGATGCCTATCGAGCCCTGCAAAAACTAAGCAGAGGTCCATACAAAGTCAACCAGAAAGCCATTAAGATTGCCTGGGCTCTAAATAAGGGCATTAAGGCTGAATTCAAGCAGTATTGGGATGTGGAATTGGGTGTTACCTATGTTCCATGGTCCAAGGTAAAGATGGAGGACTTGGACGTATTCAGAGAAGGAGGGATGCTGGATTCTGACACTCTTGCGCCAGAATGGCGAAACTCTCAGATTGAACAGAAGACTGATGAGTCTCAGAACGGCCGGCCAGAGGTGGGAAAAGTGGAAGAGACCCAAACTGTCATACCTATGCAGGTTCCTCCTGTCCAGCCAATAGGAGCAGTCGGTGTCCCACCTCCGGGATTCCCAGCACACATGAACATCCCACCACCCTCATTCCCACCTGGTGTTCCTCCACCTCCAGGTCCCTTCATGCGGCCAGCCTTTAACCCCATGCAGATGCCACCAGGATTTCTCCCACCGggtgccatgccccatatgggtGCTGCTGGCCCTCCTCCACCTACAGCAGGCATCGGGATGCCTCCAGTTGGCAGCTCTGTTGAAAACCTGTCGAATGATTCAGCAGGTCTGGGCCCAAAAATCAGCACTGATGGAGCAGATGTGTTCAACTCAGGAAACCAGGTGCCTCCTGGAGCTCCACCAGGGATGGGCATGCAGTCTCCTCCTGGTCTTCTTGGCACAAGGCCAGGTATGATGCCTCTTCAGCGGCCCCCGGGGATGCCACCTCCGCACATGCAGCGATTCCCCATTCCCCCACCTCGGGCAGGCATGCCACCCATGCCACCACAGATGAtgccacccaggggtccacctcagATGATGCACCGCGAACCTCCACCGGGTGGTTTCAGCATGCCTCCTCCACCTCATGGCATCCGGGGACCGTTCCCACCTCCCGGACCTCACTTTATGAGGCCGAGCTTACCAAGGCCTGAGGGGCCAAATGATCATGAGGCTCGACCTTTTAGAGGAGAACGTCCCGGATTAGGAAGAGGCCGAGAGCAGGACTGGTTTGGAGGACGACGGCCTTTTGGTGAGGGACGTGGTGGGGAAAGACCAGATGGACGTGAGCGGTTTGGAGGATGGCACGAGGAGCCAGAGAAACCAGGTGGGTGGGAAAGAGAACGCAGGGAGGAACGCTGGAGGAGAAGTCCAGATGGAGAACGAGGACGTGATGGTGGAGAGAGGGAACGAGGACGCGATGGTGGAGAGAGGGAAAGAGGACGCGATGGTGGAGAGAGGGAACGAGGACGTGATGGTGGAGAGAGGGAACGAGGACGCGATGGTGGAGAGCGGGAACGAGGACGCGATGGTGGAGAGCGGGAACGAGGACGCGAAGGTGGAGAGAGGGAACGAGGACGCGATACTGGAGAGCGGGAACGAGGCCGCGATGGTGAAGAACGGACCAAGCGGCCCGCAGGGAGCAGAGAGAGGAGCACACGCTGGGACCGCGACGATAGACTCGATCGATTGGGTCTGGCCGGCGAGGAACCCAATGAGAGACTCTCAGCAAATACCAACGAGCCCAGTGCAAACCCTACTAAAGAACTTGCTGAAGCCAAGCCAGATGTTCCAGCACCTTCTGCTGCAGCTACAGCAGACTCGGAAGCTTCAGAACCCATAGCAGAGAACAAATCTGAAGAACAAACACAAAAAGAGGAGTCGTAGAGGCTTCTTTACTCATTAAGACCACATGAGCTTCTTCTGTGTCAGTGCTAATCTTGAATACTGCTGGCTAAAAAGCAAAGTCCAACTGTTGTGGGACGCTTTATGCATATGAGGATTGCTTCGTCATCACAAACCAAGTTTTTCAAATTTGTGTTTTGGCAAACGTGGAGCGTTGCCTTGTGAATTTATTGTCCCACCTCAATGAAGCTTGAATGTTGTATTAAAACTGAAGATAAGGAAAAGAAACGATTAATTGTTTGCTGTACATATGCTAACATTACTCCAATAATGTTTGTAGATTTtgactggctttttttttttccaatgataTCCCTGTTGAGTTTAATATTTGGAAACGCTGACTAAAATATGACATTAAGACCCTTTTGCTGTAATGTTTTTAACTTAATGTTTacaacattcaaaaaaaaaaaaaaaaaaaacgacacaagatgtttttatcatttttaagttTTTGGAGATAGGAACTCCAAATATTTCAGCGACAGGAGGtggttttaataaaatattttcataccAAATGAATGAACTGGTTTATGCAActtgtttttaacatttattctaGTCGTGCATTTAAAACTAATCATGAATAAAAAAACTGAGCTTTTTCTGAGCTTTTAACTATA
>TCONS_00005174
CGACTTTTCCTGCGTGCTCTCAGCGCCATCTAGTGCTCGTGCTTCGCCAAAGCAGCGTTTCAATCCCATCCTGCACCGCGAGCACCGCGCCGACTCCGAGTCCGAGCTGTCTGTCTGCTGCCAGGGGCGGACATGTTGGGGCGGCCTGCTGGAGGACAGTACCACACATATTTCTGAATTTACCCGAGAAAGCGACCGCGGAGCAGAGACGGGACGCCATGGACGCCGTCAACGCGTTTAATCACGAGaaaaaagaatttCCTAAAGGTCTGgcatcacttgaggTTGTTCTCCTTGATGGACACCAAGCCCCCCATCTCGAGGGCCAAGATGATCTCTATCACCAAATCTGCCATAAAAGCTATCAAATTATACAAGCATGTTGTCCAGATAGTGGAAAAGTTCATAAAGAAGTGCAAACCGGAGTACAAAGTTCCCGGTCTCTATGTGGTGGATTCCATTGTGAGACAGTCACGGCATCAGTTTGGAGCAGATAAAGATGTGTTTGGACCCAGGTTTACTAAAAACATCACTGGGACATTTGAGAATCTATGCTTGTGTCCCACTGAAGATCGGagtaagATAGTACGAGTGCTCAACCTGTGGCAGAAGAATGGAGTGTTTAAGATCGAGGTCATTCAGCCTCTGTTGGACATGGCTGCTGGGTCCAGCAGCTCCTCAGGCTTGGACAATGGCCCAGATGCAGcttctccacagtCTCCCGTGAGGGAACAGGAGGCTCATCCTGTGGTGACGACAAACTCAATTGTAGCAGCTGTGCCTCAGCTTCAGAACTCGGATGCCTTTGCTGCAGTTGCTCAGCTAATTCAGTCTTCTCAAGGACAGCAGCTTCAGCAGATGCTGCAGAACTTTCAGCCACCAGGGAAACCTCAGTCTCCGGTGGTGGACAATAACAGGAGTCATCTCCATCTACAAGCCCAGGCTATAGCACCCCCATCCACCATCCCACATCAGCACATCCATCACGCACCGCAGCCTGTGGAAAAGAAAGCCACCTTCGACAAGacaattcTTGACCGCTTTGACTATGACGATGAGCCAGATGCAGGAGAGGATGCCAAGAAGGAGGAAGCGCAGTCTGTCCAACCTTCTATGGGTTTTCCTGAGCAAACTGTCCCAGGATTTcctccagccaatcagatgcAGCACTTTCAACAGCATATGATGGCTGTATCACAGCGCCAACAGGTTGTTCTACCTTCAAATGGACAGGTCCAAGGCTTTGGTCTCATGACCTCTCAGCCCTATCCAGGCATGATGCCTCCAATGGGGCAGCCGAACGCAGCTTTCCCTCCTCAAAATGAGGCCTTCAATCAACTCATGTCTGGACATGCGGAAAGTCTGATGAATTCAGATGCATCTGCGAGGTCTGCCCATGAAGACAAGAGGTCAAGGTCACGCTCGGGGTCGAGGTCTCCTAAAAGAAGAAGGTCTCGATCCAATTCCCGGTCCAGACGAATGAGGCATCGACGATCTCGGTCTCGAGAACGGCGGCGTCAGTCACCTCGCTCGCGCTCTCAGGAAAGGAGAGACAGAGAAAAGGAAAGAGAACGAAGACAGAAAGGCCTCCCtcctgttaaaaataacacaCTCAGTGTGTGCAGCACAACTCTATGGGTGGGTCAGCTGGATAAGAGGACACAGCAGCAGGACGTGGCCTCTATACTAGAGGAGTTTGGCCAGATAGATTCAATTAATATGATTCCTCCACGAGGTTGTGCCTACATCGTCATGATTCATCGTCAAGATGCCTATCGAGCCCTGCAAAAACTAAGCAGAGGTCCATACAAAGTCAACCAGAAAGCCATTAAGATTGCCTGGGCTCTAAATAAGGGCATTAAGGCTGAATTCAAGCAGTATTGGGATGTGGAATTGGGTGTTACCTATGTTCCATGGTCCAAGGTAAAGATGGAGGACTTGGACGTATTCAGAGAAGGAGGGATGCTGGATTCTGACACTCTTGCGCCAGAATGGCGAAACTCTCAGATTGAACAGAAGACTGATGAGTCTCAGAACGGCCGGCCAGAGGTGGGAAAAGTGGAAGAGACCCAAACTGTCATACCTATGCAGGTTCCTCCTGTCCAGCCAATAGGAGCAGTCGGTGTCCCACCTCCGGGATTCCCAGCACACATGAACATCCCACCACCCTCATTCCCACCTGGTGTTCCTCCACCTCCAGGTCCCTTCATGCGGCCAGCCTTTAACCCCATGCAGATGCCACCAGGATTTCTCCCACCGggtgccatgccccatatgggtGCTGCTGGCCCTCCTCCACCTACAGCAGGCATCGGGATGCCTCCAGTTGGCAGCTCTGTTGAAAACCTGTCGAATGATTCAGCAGGTCTGGGCCCAAAAATCAGCACTGATGGAGCAGATGTGTTCAACTCAGGAAACCAGGTGCCTCCTGGAGCTCCACCAGGGATGGGCATGCAGTCTCCTCCTGGTCTTCTTGGCACAAGGCCAGGTATGATGCCTCTTCAGCGGCCCCCGGGGATGCCACCTCCGCACATGCAGCGATTCCCCATTCCCCCACCTCGGGCAGGCATGCCACCCATGCCACCACAGATGAtgccacccaggggtccacctcagATGATGCACCGCGAACCTCCACCGGGTGGTTTCAGCATGCCTCCTCCACCTCATGGCATCCGGGGACCGTTCCCACCTCCCGGACCTCACTTTATGAGGCCGAGCTTACCAAGGCCTGAGGGGCCAAATGATCATGAGGCTCGACCTTTTAGAGGAGAACGTCCCGGATTAGGAAGAGGCCGAGAGCAGGACTGGTTTGGAGGACGACGGCCTTTTGGTGAGGGACGTGGTGGGGAAAGACCAGATGGACGTGAGCGGTTTGGAGGATGGCACGAGGAGCCAGAGAAACCAGGTGGGTGGGAAAGAGAACGCAGGGAGGAACGCTGGAGGAGAAGTCCAGATGGAGAACGAGGACGTGATGGTGGAGAGAGGGAACGAGGACGCGATGGTGGAGAGAGGGAAAGAGGACGCGATGGTGGAGAGAGGGAACGAGGACGTGATGGTGGAGAGAGGGAACGAGGACGCGATGGTGGAGAGCGGGAACGAGGACGCGATGGTGGAGAGCGGGAACGAGGACGCGAAGGTGGAGAGAGGGAACGAGGACGCGATACTGGAGAGCGGGAACGAGGCCGCGATGGTGAAGAACGGACCAAGCGGCCCGCAGGGAGCAGAGAGAGGAGCACACGCTGGGACCGCGACGATAGACTCGATCGATTGGGTCTGGCCGGCGAGGAACCCAATGAGAGACTCTCAGCAAATACCAACGAGCCCAGTGCAAACCCTACTAAAGAACTTGCTGAAGCCAAGCCAGATGTTCCAGCACCTTCTGCTGCAGCTACAGCAGACTCGGAAGCTTCAGAACCCATAGCAGAGAACAAATCTGAAGAACAAACACAAAAAGAGGAGTCGTAG

Function

symbol description
sod1 Enables superoxide dismutase activity. Acts upstream of or within several processes, including neuron cellular homeostasis; response to metal ion; and response to methylmercury. Predicted to be located in cytoplasm. Predicted to be active in several cellular components, including cytosol; mitochondrion; and peroxisome. Is expressed in several structures, including atrium; blastoderm; blastodisc; musculature system; and nervous system. Used to study amyotrophic lateral sclerosis. Human ortholog(s) of this gene implicated in several diseases, including Down syndrome; artery disease (multiple); eye disease (multiple); glucose metabolism disease (multiple); and neurodegenerative disease (multiple). Orthologous to human SOD1 (superoxide dismutase 1).

GO:

id name namespace
GO:0070050 neuron cellular homeostasis biological_process
GO:0009410 response to xenobiotic stimulus biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0051597 response to methylmercury biological_process
GO:0006801 superoxide metabolic process biological_process
GO:0019430 removal of superoxide radicals biological_process
GO:0010038 response to metal ion biological_process
GO:0005777 peroxisome cellular_component
GO:0005829 cytosol cellular_component
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005739 mitochondrion cellular_component
GO:0004784 superoxide dismutase activity molecular_function
GO:0005507 copper ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0016209 antioxidant activity molecular_function

KEGG:

id description
ko04146 Peroxisome
ko04213 Longevity regulating pathway - multiple species
ko05208 Chemical carcinogenesis - reactive oxygen species
ko05012 Parkinson disease
ko05014 Amyotrophic lateral sclerosis
ko05016 Huntington disease
ko05020 Prion disease
ko05022 Pathways of neurodegeneration - multiple diseases

ZFIN:

id description
ZDB-GENE-990415-258 Enables superoxide dismutase activity. Acts upstream of or within several processes, including neuron cellular homeostasis; response to metal ion; and response to methylmercury. Predicted to be located in cytoplasm. Predicted to be active in several cellular components, including cytosol; mitochondrion; and peroxisome. Is expressed in several structures, including atrium; blastoderm; blastodisc; musculature system; and nervous system. Used to study amyotrophic lateral sclerosis. Human ortholog(s) of this gene implicated in several diseases, including Down syndrome; artery disease (multiple); eye disease (multiple); glucose metabolism disease (multiple); and neurodegenerative disease (multiple). Orthologous to human SOD1 (superoxide dismutase 1).
ZDB-GENE-030131-9003 Predicted to enable RNA binding activity. Orthologous to human SCAF4 (SR-related CTD associated factor 4).

Ensembl:

ensembl_id ENSDARG00000043848 ENSDARG00000077093

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005170 False 773 mRNA 0.46 5 25694395 25699454
TCONS_00005171 False 644 lncRNA 0.42 2 25697159 25699359
TCONS_00005172 False 7153 mRNA 0.44 20 25697636 25716953
TCONS_00005173 False 3968 mRNA 0.50 20 25700711 25716841
TCONS_00005174 True 3468 mRNA 0.54 21 25701358 25716953

Neighbor

gene id symbol gene type direction distance location
XLOC_002793 NA coding downstream 2725 25690872 ~ 25691670 (-)
XLOC_002792 NA coding downstream 7177 25686901 ~ 25687218 (-)
XLOC_002791 tiam1a coding downstream 36889 25572372 ~ 25657506 (-)
XLOC_002789 grik1a coding downstream 123748 25402463 ~ 25570647 (-)
XLOC_002790 NA coding downstream 194921 25494173 ~ 25499474 (-)
XLOC_002795 postna coding upstream 45243 25762196 ~ 25769334 (-)
XLOC_002796 postna coding upstream 53514 25770467 ~ 25817854 (-)
XLOC_002797 ftr54 coding upstream 103043 25819996 ~ 25823258 (-)
XLOC_002798 trpc4a coding upstream 112309 25829262 ~ 25860102 (-)
XLOC_002799 trim3b coding upstream 412877 26129830 ~ 26179805 (-)
XLOC_002788 NA non-coding downstream 303722 25380998 ~ 25390673 (-)
XLOC_002779 NA non-coding downstream 841870 24833696 ~ 24852525 (-)
XLOC_002802 NA non-coding upstream 724099 26441052 ~ 26447171 (-)
XLOC_002807 NA non-coding upstream 1119883 26836836 ~ 26872413 (-)
XLOC_002808 CR545465.2 non-coding upstream 1175614 26892567 ~ 26895076 (-)
XLOC_002809 NA non-coding upstream 1184319 26901272 ~ 26902305 (-)
XLOC_002813 NA non-coding upstream 1283609 27000562 ~ 27002614 (-)

Expression


Co-expression Network