G1017541


Basic Information

Item Value
gene id G1017541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 75158259 ~ 75158466 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1157237
cccttggcatttttccccattttgttgccttacaacctggaattaaaatgtattttgggggggtttgtatcatttgatttaaacctcatccctaccactttgaagatgcaaaatattttctaTTGTGAATCAAACAAGAAatgagacagaaaaacagaaaacttgagcatgcataactattcaccctcccaaagtcaatactttgtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1157237 True 208 lncRNA 0.36 1 75158259 75158466

Neighbor

gene id symbol gene type direction distance location
LOC110536385 suds3 coding upstream 269994 74877456 ~ 74888265 (+)
LOC118937390 NA coding upstream 427111 74722874 ~ 74731148 (+)
pebp1 pebp1 coding upstream 446642 74707300 ~ 74711617 (+)
rfc5 rfc5 coding upstream 460644 74689455 ~ 74697615 (+)
LOC118937457 NA coding upstream 637213 74519385 ~ 74521046 (+)
LOC110536389 LOC106579825 coding downstream 124090 75282556 ~ 75294050 (+)
LOC118937399 NA coding downstream 215633 75374099 ~ 75383293 (+)
trnaw-cca-7 NA coding downstream 220294 75378760 ~ 75378831 (+)
LOC110536393 NA coding downstream 708166 75866632 ~ 75878332 (+)
LOC110535118 LOC106570809 coding downstream 951889 76110124 ~ 76131124 (+)
G1017533 NA non-coding upstream 13232 75144754 ~ 75145027 (+)
G1017529 NA non-coding upstream 22156 75135601 ~ 75136103 (+)
G1017524 NA non-coding upstream 31273 75126746 ~ 75126986 (+)
G1017381 NA non-coding upstream 98028 75058002 ~ 75060231 (+)
G1017300 NA non-coding upstream 267115 74890636 ~ 74891144 (+)
G1017546 NA non-coding downstream 5583 75164049 ~ 75164254 (+)
G1017547 NA non-coding downstream 10337 75168803 ~ 75169076 (+)
G1017548 NA non-coding downstream 11078 75169544 ~ 75169745 (+)
G1017554 NA non-coding downstream 23466 75181932 ~ 75183946 (+)
G1017555 NA non-coding downstream 27589 75186055 ~ 75186595 (+)
LOC110535110 LOC106579812 other upstream 1989817 73155366 ~ 73254792 (+)
G1014834 NA other upstream 2397314 72760521 ~ 72760945 (+)
G1013922 NA other upstream 3278587 71879296 ~ 71879672 (+)
G1013617 NA other upstream 3317789 71838302 ~ 71840882 (+)
LOC110536353 LOC106580623 other upstream 3360944 71738585 ~ 71797315 (+)
G1017593 NA other downstream 141872 75269723 ~ 75328737 (+)
LOC110536406 LOC106570821 other downstream 1330042 76396096 ~ 76600566 (+)
G1018678 NA other downstream 1365672 76524138 ~ 76525567 (+)
G1019189 ptar1 other downstream 1660039 76818505 ~ 76821968 (+)
mamdc2a LOC106570826 other downstream 1731261 76889699 ~ 76939449 (+)

Expression


Co-expression Network